KEGG   PATHWAY: neo00630
Entry
neo00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Neorhizobium sp. SOG26
Class
Metabolism; Carbohydrate metabolism
Pathway map
neo00630  Glyoxylate and dicarboxylate metabolism
neo00630

Module
neo_M00012  Glyoxylate cycle [PATH:neo00630]
neo_M00621  Glycine cleavage system [PATH:neo00630]
neo_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:neo00630]
Other DBs
GO: 0046487 0043648
Organism
Neorhizobium sp. SOG26 [GN:neo]
Gene
CYG48_01345  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
CYG48_14950  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CYG48_12655  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
CYG48_15275  malate synthase G [KO:K01638] [EC:2.3.3.9]
CYG48_13635  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CYG48_07260  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
CYG48_08115  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
CYG48_13880  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
CYG48_00685  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CYG48_14165  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
CYG48_14305  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CYG48_14160  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
CYG48_04525  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
CYG48_15360  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
CYG48_15350  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
CYG48_15365  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CYG48_19975  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
CYG48_19970  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
CYG48_19965  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
CYG48_19110  catalase [KO:K03781] [EC:1.11.1.6]
CYG48_15865  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
CYG48_16025  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
CYG48_00445  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
CYG48_01735  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
CYG48_07910  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
CYG48_08130  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
CYG48_10070  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CYG48_01320  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CYG48_07055  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
CYG48_03255  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CYG48_08585  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CYG48_04070  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CYG48_07945  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
CYG48_07935  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
CYG48_13590  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CYG48_10375  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CYG48_08060  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CYG48_07940  gcvH; glycine cleavage system protein H [KO:K02437]
CYG48_19415  glycerate kinase [KO:K11529] [EC:2.7.1.165]
CYG48_11375  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CYG48_13495  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
CYG48_13505  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
CYG48_13510  formate dehydrogenase [KO:K00124]
CYG48_13515  formate dehydrogenase subunit gamma [KO:K00127]
CYG48_19235  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
CYG48_17065  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
CYG48_14525  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
CYG48_14680  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
neo00010  Glycolysis / Gluconeogenesis
neo00020  Citrate cycle (TCA cycle)
neo00030  Pentose phosphate pathway
neo00053  Ascorbate and aldarate metabolism
neo00071  Fatty acid degradation
neo00230  Purine metabolism
neo00250  Alanine, aspartate and glutamate metabolism
neo00260  Glycine, serine and threonine metabolism
neo00620  Pyruvate metabolism
neo00710  Carbon fixation by Calvin cycle
neo00750  Vitamin B6 metabolism
neo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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