KEGG   PATHWAY: osg00630
Entry
osg00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Oceanicoccus sagamiensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
osg00630  Glyoxylate and dicarboxylate metabolism
osg00630

Module
osg_M00012  Glyoxylate cycle [PATH:osg00630]
osg_M00621  Glycine cleavage system [PATH:osg00630]
Other DBs
GO: 0046487 0043648
Organism
Oceanicoccus sagamiensis [GN:osg]
Gene
BST96_03620  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BST96_04770  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BST96_03630  malate synthase G [KO:K01638] [EC:2.3.3.9]
BST96_15540  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BST96_19720  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
BST96_18545  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
BST96_14595  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BST96_18985  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BST96_02560  hypothetical protein [KO:K00626] [EC:2.3.1.9]
BST96_02625  hypothetical protein [KO:K00626] [EC:2.3.1.9]
BST96_02700  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BST96_02925  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BST96_16965  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BST96_09085  hypothetical protein [KO:K00626] [EC:2.3.1.9]
BST96_19455  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
BST96_11065  hypothetical protein [KO:K05606] [EC:5.1.99.1]
BST96_07520  lactoylglutathione lyase [KO:K05606] [EC:5.1.99.1]
BST96_19450  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BST96_04045  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
BST96_04565  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
BST96_09355  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BST96_16295  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
BST96_11770  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BST96_09545  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BST96_04725  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BST96_18745  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BST96_05250  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BST96_05265  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
BST96_02510  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BST96_09905  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BST96_01625  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
BST96_00205  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
BST96_18485  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
BST96_18750  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
BST96_01620  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
BST96_19685  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BST96_16930  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BST96_05890  glycine cleavage system protein H [KO:K02437]
BST96_06280  hypothetical protein [KO:K15918] [EC:2.7.1.31]
BST96_06710  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BST96_13880  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BST96_18840  hypothetical protein [KO:K00126] [EC:1.17.1.9]
BST96_18850  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
BST96_18855  formate dehydrogenase [KO:K00124]
BST96_18860  formate dehydrogenase subunit gamma [KO:K00127]
BST96_18465  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
osg00010  Glycolysis / Gluconeogenesis
osg00020  Citrate cycle (TCA cycle)
osg00030  Pentose phosphate pathway
osg00053  Ascorbate and aldarate metabolism
osg00071  Fatty acid degradation
osg00230  Purine metabolism
osg00250  Alanine, aspartate and glutamate metabolism
osg00260  Glycine, serine and threonine metabolism
osg00620  Pyruvate metabolism
osg00710  Carbon fixation by Calvin cycle
osg00750  Vitamin B6 metabolism
osg00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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