KEGG   PATHWAY: osg03440
Entry
osg03440                    Pathway                                
Name
Homologous recombination - Oceanicoccus sagamiensis
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
osg03440  Homologous recombination
osg03440

Other DBs
GO: 0000724
Organism
Oceanicoccus sagamiensis [GN:osg]
Gene
BST96_15530  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
BST96_10415  single-stranded DNA-binding protein [KO:K03111]
BST96_07635  DNA replication/repair protein RecF [KO:K03629]
BST96_15305  DNA repair protein RecO [KO:K03584]
BST96_18310  recombination protein RecR [KO:K06187]
BST96_20195  recombinase RecA [KO:K03553]
BST96_08030  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
BST96_13735  Holliday junction branch migration protein RuvA [KO:K03550]
BST96_13740  Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
BST96_13730  crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
BST96_08510  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
BST96_13285  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
BST96_07630  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
BST96_18320  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
BST96_11520  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
BST96_16355  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
BST96_14080  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
BST96_18135  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
BST96_15400  hypothetical protein [KO:K02339] [EC:2.7.7.7]
BST96_09840  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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