KEGG   PATHWAY: ota00630
Entry
ota00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Ostreococcus tauri
Class
Metabolism; Carbohydrate metabolism
Pathway map
ota00630  Glyoxylate and dicarboxylate metabolism
ota00630

Module
ota_M00621  Glycine cleavage system [PATH:ota00630]
Other DBs
GO: 0046487 0043648
Organism
Ostreococcus tauri [GN:ota]
Gene
OT_ostta02g02370  AMP-dependent synthetase/ligase [KO:K01895] [EC:6.2.1.1]
OT_ostta03g02570  AMP-dependent synthetase/ligase [KO:K01895] [EC:6.2.1.1]
OT_ostta06g00150  Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal [KO:K00025] [EC:1.1.1.37]
OT_ostta08g00050  Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal [KO:K00026] [EC:1.1.1.37]
OT_ostta06g02270  Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal [KO:K00026] [EC:1.1.1.37]
OT_ostta03g00180  Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal [KO:K00026] [EC:1.1.1.37]
OT_ostta05g01760  Citrate synthase active site [KO:K01647] [EC:2.3.3.1]
OT_ostta17g02090  Citrate synthase-like, small alpha subdomain [KO:K01647] [EC:2.3.3.1]
OT_ostta05g00220  Hydroxy monocarboxylic acid anion dehydrogenase,HIBADH-type [KO:K18121] [EC:1.1.1.79 1.1.1.-]
OT_ostta12g00290  Hydroxy monocarboxylic acid anion dehydrogenase,HIBADH-type [KO:K18121] [EC:1.1.1.79 1.1.1.-]
OT_ostta08g02360  HAD-superfamily hydrolase, subfamily IIA [KO:K19269] [EC:3.1.3.18 3.1.3.48]
OT_ostta15g02560  2-phosphoglycolate phosphatase, eukaryotic [KO:K19269] [EC:3.1.3.18 3.1.3.48]
OstapCp59  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
OT_ostta18g01880  Ribulose bisphosphate carboxylase, small chain [KO:K01602] [EC:4.1.1.39]
OT_ostta18g01890  Ribulose bisphosphate carboxylase, small chain [KO:K01602] [EC:4.1.1.39]
OT_ostta18g01090  Pyridoxal phosphate-dependent transferase, major region, subdomain 2 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
OT_ostta14g01900  Glutamate synthase, alpha subunit, C-terminal [KO:K00284] [EC:1.4.7.1]
OT_ostta01g05020  Glutamine synthetase, glycine-rich site [KO:K01915] [EC:6.3.1.2]
OT_ostta03g00920  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
OT_ostta14g02420  Serine hydroxymethyltransferase, pyridoxal phosphate binding site [KO:K00600] [EC:2.1.2.1]
OT_ostta19g00170  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
OT_ostta10g03200  Pyridoxal phosphate-dependent transferase, major region, subdomain 1 [KO:K00281] [EC:1.4.4.2]
OT_ostta10g02780  GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 [KO:K00605] [EC:2.1.2.10]
OT_ostta04g04830  Pyridine nucleotide-disulphide oxidoreductase,class I, active site [KO:K00382] [EC:1.8.1.4]
OT_ostta11g02820  Pyridine nucleotide-disulphide oxidoreductase,class I, active site [KO:K00382] [EC:1.8.1.4]
OT_ostta15g02900  Glycine cleavage H-protein, subgroup [KO:K02437]
OT_ostta06g01870  P-loop containing nucleoside triphosphate hydrolase [KO:K15918] [EC:2.7.1.31]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ota00010  Glycolysis / Gluconeogenesis
ota00020  Citrate cycle (TCA cycle)
ota00030  Pentose phosphate pathway
ota00053  Ascorbate and aldarate metabolism
ota00071  Fatty acid degradation
ota00230  Purine metabolism
ota00250  Alanine, aspartate and glutamate metabolism
ota00260  Glycine, serine and threonine metabolism
ota00620  Pyruvate metabolism
ota00710  Carbon fixation by Calvin cycle
ota00750  Vitamin B6 metabolism
ota00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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