KEGG   PATHWAY: palz00710
Entry
palz00710                   Pathway                                
Name
Carbon fixation by Calvin cycle - Populus alba (white poplar)
Class
Metabolism; Energy metabolism
Pathway map
palz00710  Carbon fixation by Calvin cycle
palz00710

Module
palz_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:palz00710]
palz_M00168  CAM (Crassulacean acid metabolism), dark [PATH:palz00710]
palz_M00169  CAM (Crassulacean acid metabolism), light [PATH:palz00710]
palz_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:palz00710]
palz_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:palz00710]
palz_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:palz00710]
Organism
Populus alba (white poplar) [GN:palz]
Gene
4178172  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
118045964  LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
118058060  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
118055981  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
118029738  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
118051575  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
118043073  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
118043074  phosphoglycerate kinase, cytosolic isoform X1 [KO:K00927] [EC:2.7.2.3]
118055740  phosphoglycerate kinase, chloroplastic-like [KO:K00927] [EC:2.7.2.3]
118055741  phosphoglycerate kinase, cytosolic-like [KO:K00927] [EC:2.7.2.3]
118045925  phosphoglycerate kinase-like isoform X1 [KO:K00927] [EC:2.7.2.3]
118042841  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
118043079  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
118053494  glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic-like [KO:K00134] [EC:1.2.1.12]
118044736  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic isoform X1 [KO:K00134] [EC:1.2.1.12]
118055744  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
118057607  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
118048822  glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic [KO:K00134] [EC:1.2.1.12]
118041836  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
118042057  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
118044122  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
118061901  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
118063117  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
118057892  fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
118037650  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 isoform X1 [KO:K01623] [EC:4.1.2.13]
118058968  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
118049051  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
118039694  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
118039882  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
118050602  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
118029467  fructose-bisphosphate aldolase 5, cytosolic [KO:K01623] [EC:4.1.2.13]
118051590  fructose-bisphosphate aldolase 1, cytoplasmic [KO:K01623] [EC:4.1.2.13]
118041449  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
118036145  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
118037544  fructose-1,6-bisphosphatase, chloroplastic-like isoform X1 [KO:K03841] [EC:3.1.3.11]
118037545  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
118062250  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
118041315  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
118042218  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
118059789  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
118052311  sedoheptulose-1,7-bisphosphatase, chloroplastic-like [KO:K01100] [EC:3.1.3.37]
118059631  sedoheptulose-1,7-bisphosphatase, chloroplastic-like [KO:K01100] [EC:3.1.3.37]
118053109  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
118053110  probable ribose-5-phosphate isomerase 3, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
118044052  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
118045334  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
118046356  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
118039867  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
118040787  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
118051518  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
118028672  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
118052289  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
118053720  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
118058775  triosephosphate isomerase, chloroplastic-like [KO:K01803] [EC:5.3.1.1]
118059717  triosephosphate isomerase, cytosolic isoform X1 [KO:K01803] [EC:5.3.1.1]
118028015  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
118040503  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
118063477  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
118033380  ribulose-5-phosphate-3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
118042699  transaldolase isoform X1 [KO:K00616] [EC:2.2.1.2]
118054409  transaldolase-like [KO:K00616] [EC:2.2.1.2]
118035986  transaldolase isoform X1 [KO:K00616] [EC:2.2.1.2]
118043397  phosphoenolpyruvate carboxylase, housekeeping isozyme [KO:K01595] [EC:4.1.1.31]
118044184  phosphoenolpyruvate carboxylase 2-like [KO:K01595] [EC:4.1.1.31]
118047465  phosphoenolpyruvate carboxylase 4-like [KO:K01595] [EC:4.1.1.31]
118039984  phosphoenolpyruvate carboxylase 4-like [KO:K01595] [EC:4.1.1.31]
118053496  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
118053497  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
118051656  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
118063162  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
118031532  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
118037304  alanine aminotransferase 1, mitochondrial-like isoform X1 [KO:K00814] [EC:2.6.1.2]
118037900  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
118045367  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
118037955  glutamate--glyoxylate aminotransferase 2-like isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
118034574  pyruvate, phosphate dikinase, chloroplastic [KO:K01006] [EC:2.7.9.1]
118030667  NADP-dependent malic enzyme isoform X1 [KO:K00029] [EC:1.1.1.40]
118042563  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
118053687  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
118051612  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
118060285  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
118041806  LOW QUALITY PROTEIN: aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
118035627  LOW QUALITY PROTEIN: aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
118048142  aspartate aminotransferase, mitochondrial-like isoform X1 [KO:K14455] [EC:2.6.1.1]
118042194  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
118042251  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
118057252  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
118048848  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
118051793  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
118063178  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
118063548  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
118042730  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
118042731  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
118054103  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
118055136  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
118035036  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
118048618  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
118041498  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
118042322  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
118034113  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
118057732  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
palz00010  Glycolysis / Gluconeogenesis
palz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
palz00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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