KEGG   PATHWAY: panc00630
Entry
panc00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Paenisporosarcina antarctica
Class
Metabolism; Carbohydrate metabolism
Pathway map
panc00630  Glyoxylate and dicarboxylate metabolism
panc00630

Module
panc_M00012  Glyoxylate cycle [PATH:panc00630]
panc_M00621  Glycine cleavage system [PATH:panc00630]
Other DBs
GO: 0046487 0043648
Organism
Paenisporosarcina antarctica [GN:panc]
Gene
E2636_15355  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
E2636_05705  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
E2636_14720  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
E2636_03485  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
E2636_00310  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
E2636_15445  malate synthase G [KO:K01638] [EC:2.3.3.9]
E2636_15365  malate synthase G [KO:K01638] [EC:2.3.3.9]
E2636_05895  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
E2636_15950  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
E2636_05885  citZ; citrate synthase [KO:K01647] [EC:2.3.3.1]
E2636_17155  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
E2636_16915  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
E2636_07870  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
E2636_09705  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
E2636_13620  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
E2636_15700  thiolase family protein [KO:K00626] [EC:2.3.1.9]
E2636_03645  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
E2636_00305  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
E2636_08790  fabG; 3-oxoacyl-[acyl-carrier-protein] reductase [KO:K00023] [EC:1.1.1.36]
E2636_08810  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
E2636_09005  VOC family protein [KO:K05606] [EC:5.1.99.1]
E2636_07395  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
E2636_07400  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
E2636_07370  hypothetical protein [KO:K01847] [EC:5.4.99.2]
E2636_07375  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
E2636_15450  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
E2636_12085  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
E2636_15460  FAD-binding oxidoreductase [KO:K11472] [EC:1.1.99.14]
E2636_12080  (Fe-S)-binding protein [KO:K11473] [EC:1.1.99.14]
E2636_15455  (Fe-S)-binding protein [KO:K11473] [EC:1.1.99.14]
E2636_14785  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
E2636_00070  catalase [KO:K03781] [EC:1.11.1.6]
E2636_12410  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
E2636_15595  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
E2636_03115  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
E2636_09765  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
E2636_13485  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
E2636_07180  aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
E2636_07185  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
E2636_07175  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
E2636_08180  FAD-dependent oxidoreductase [KO:K00382] [EC:1.8.1.4]
E2636_10790  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
E2636_07350  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
E2636_04990  gcvH; glycine cleavage system protein GcvH [KO:K02437]
E2636_15025  glycerate kinase [KO:K00865] [EC:2.7.1.165]
E2636_12210  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
E2636_15625  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
E2636_16335  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
E2636_04345  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
E2636_15350  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
panc00010  Glycolysis / Gluconeogenesis
panc00020  Citrate cycle (TCA cycle)
panc00030  Pentose phosphate pathway
panc00053  Ascorbate and aldarate metabolism
panc00071  Fatty acid degradation
panc00230  Purine metabolism
panc00250  Alanine, aspartate and glutamate metabolism
panc00260  Glycine, serine and threonine metabolism
panc00620  Pyruvate metabolism
panc00710  Carbon fixation by Calvin cycle
panc00750  Vitamin B6 metabolism
panc00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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