KEGG   PATHWAY: panr00630
Entry
panr00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas antarctica
Class
Metabolism; Carbohydrate metabolism
Pathway map
panr00630  Glyoxylate and dicarboxylate metabolism
panr00630

Module
panr_M00621  Glycine cleavage system [PATH:panr00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas antarctica [GN:panr]
Gene
A7J50_3452  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
A7J50_2979  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
A7J50_4528  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
A7J50_4991  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
A7J50_5354  malate synthase [KO:K01638] [EC:2.3.3.9]
A7J50_1949  Citrate synthase [KO:K01647] [EC:2.3.3.1]
A7J50_1666  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
A7J50_3192  Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
A7J50_2977  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7J50_2153  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7J50_3331  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7J50_0637  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7J50_2581  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7J50_4425  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7J50_4602  3-hydroxybutyryl-CoA dehydratase [KO:K17865] [EC:4.2.1.55]
A7J50_3910  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
A7J50_5062  catalase [KO:K03781] [EC:1.11.1.6]
A7J50_0073  hydroperoxidase [KO:K03781] [EC:1.11.1.6]
A7J50_5224  Catalase [KO:K03781] [EC:1.11.1.6]
A7J50_3558  catalase [KO:K03781] [EC:1.11.1.6]
A7J50_0967  2-ketogluconate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
A7J50_0921  Glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
A7J50_0047  Putative hydrolase [KO:K01091] [EC:3.1.3.18]
A7J50_5287  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
A7J50_4477  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
A7J50_5581  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7J50_5583  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7J50_0334  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7J50_2166  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7J50_2449  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7J50_1637  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7J50_5380  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A7J50_5054  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A7J50_4659  Glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
A7J50_4661  Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
A7J50_5605  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
A7J50_3622  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
A7J50_1956  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A7J50_4658  Glycine cleavage system H protein [KO:K02437]
A7J50_5604  glycine cleavage system protein H [KO:K02437]
A7J50_1932  Glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
A7J50_1931  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
A7J50_3000  glycerate kinase [KO:K00865] [EC:2.7.1.165]
A7J50_1929  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
A7J50_2678  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
A7J50_4606  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A7J50_4945  kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
A7J50_5375  Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
A7J50_4707  Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
A7J50_3283  Formamidase [KO:K01455] [EC:3.5.1.49]
A7J50_0357  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
panr00010  Glycolysis / Gluconeogenesis
panr00020  Citrate cycle (TCA cycle)
panr00030  Pentose phosphate pathway
panr00053  Ascorbate and aldarate metabolism
panr00071  Fatty acid degradation
panr00230  Purine metabolism
panr00250  Alanine, aspartate and glutamate metabolism
panr00260  Glycine, serine and threonine metabolism
panr00620  Pyruvate metabolism
panr00710  Carbon fixation by Calvin cycle
panr00750  Vitamin B6 metabolism
panr00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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