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Entry
Name
ABC transporters - Pantoea sp. At-9b
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Pantoea sp. At-9b [GN:
pao ]
Gene
Pat9b_2847 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K02048 ]
Pat9b_3877 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K23163 ]
Pat9b_5228 binding-protein-dependent transport systems inner membrane component [KO:K15496 ]
Pat9b_3662 binding-protein-dependent transport systems inner membrane component [KO:K15552 ]
Pat9b_5155 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [KO:K15553 ]
Pat9b_1785 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [KO:K15553 ]
Pat9b_1354 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [KO:K15553 ]
Pat9b_4203 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [KO:K15553 ]
Pat9b_2824 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [KO:K15553 ]
Pat9b_1352 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Pat9b_4839 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Pat9b_5344 binding-protein-dependent transport systems inner membrane component [KO:K15599 ]
Pat9b_5580 molybdate ABC transporter periplasmic molybdate-binding protein [KO:K02020 ]
Pat9b_1154 molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
Pat9b_5455 binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Pat9b_3337 binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Pat9b_3737 binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Pat9b_1511 binding-protein-dependent transport systems inner membrane component [KO:K11070 ]
Pat9b_1512 binding-protein-dependent transport systems inner membrane component [KO:K11071 ]
Pat9b_1294 binding-protein-dependent transport systems inner membrane component [KO:K11074 ]
Pat9b_1293 binding-protein-dependent transport systems inner membrane component [KO:K11075 ]
Pat9b_3028 Substrate-binding region of ABC-type glycine betaine transport system [KO:K02002 ]
Pat9b_3027 binding-protein-dependent transport systems inner membrane component [KO:K02001 ]
Pat9b_1209 Substrate-binding region of ABC-type glycine betaine transport system [KO:K05845 ]
Pat9b_1969 Substrate-binding region of ABC-type glycine betaine transport system [KO:K05845 ]
Pat9b_1210 binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
Pat9b_1212 binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
Pat9b_1968 binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
Pat9b_1970 binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
Pat9b_5625 binding-protein-dependent transport systems inner membrane component [KO:K10109 ]
Pat9b_5626 binding-protein-dependent transport systems inner membrane component [KO:K10110 ]
Pat9b_0371 binding-protein-dependent transport systems inner membrane component [KO:K10118 ]
Pat9b_0372 binding-protein-dependent transport systems inner membrane component [KO:K10119 ]
Pat9b_5571 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Pat9b_2452 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Pat9b_0383 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Pat9b_5248 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Pat9b_3957 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Pat9b_4165 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Pat9b_1749 periplasmic binding protein/LacI transcriptional regulator [KO:K10537 ]
Pat9b_1742 periplasmic binding protein/LacI transcriptional regulator [KO:K23508 ]
Pat9b_2638 periplasmic binding protein/LacI transcriptional regulator [KO:K10540 ]
Pat9b_0050 D-xylose ABC transporter, periplasmic substrate-binding protein [KO:K10543 ]
Pat9b_1543 periplasmic binding protein/LacI transcriptional regulator [KO:K17202 ]
Pat9b_1613 periplasmic binding protein/LacI transcriptional regulator [KO:K17202 ]
Pat9b_2493 periplasmic binding protein/LacI transcriptional regulator [KO:K17213 ]
Pat9b_4540 periplasmic binding protein/LacI transcriptional regulator protein [KO:K17213 ]
Pat9b_3790 periplasmic binding protein/LacI transcriptional regulator [KO:K17213 ]
Pat9b_4960 binding-protein-dependent transport systems inner membrane component [KO:K05814 ]
Pat9b_0267 binding-protein-dependent transport systems inner membrane component [KO:K05814 ]
Pat9b_4959 binding-protein-dependent transport systems inner membrane component [KO:K05815 ]
Pat9b_0268 binding-protein-dependent transport systems inner membrane component [KO:K05815 ]
Pat9b_3984 phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
Pat9b_2906 binding-protein-dependent transport systems inner membrane component [KO:K02037 ]
Pat9b_2459 phosphonate ABC transporter, periplasmic phosphonate binding protein [KO:K02044 ]
Pat9b_2573 cationic amino acid ABC transporter, periplasmic binding protein [KO:K10013 ]
Pat9b_2753 cationic amino acid ABC transporter, periplasmic binding protein [KO:K10014 ]
Pat9b_1252 cationic amino acid ABC transporter, periplasmic binding protein [KO:K10036 ]
Pat9b_1297 cationic amino acid ABC transporter, periplasmic binding protein [KO:K09996 ]
Pat9b_1300 cationic amino acid ABC transporter, periplasmic binding protein [KO:K09997 ]
Pat9b_5478 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Pat9b_0778 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Pat9b_2526 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Pat9b_5159 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Pat9b_2174 binding-protein-dependent transport systems inner membrane component [KO:K15581 ]
Pat9b_2173 binding-protein-dependent transport systems inner membrane component [KO:K15582 ]
Pat9b_0108 binding-protein-dependent transport systems inner membrane component [KO:K12369 ]
Pat9b_0109 binding-protein-dependent transport systems inner membrane component [KO:K12370 ]
Pat9b_2050 binding-protein-dependent transport systems inner membrane component [KO:K19227 ]
Pat9b_2051 binding-protein-dependent transport systems inner membrane component [KO:K19228 ]
Pat9b_5330 binding-protein-dependent transport systems inner membrane component [KO:K13890 ]
Pat9b_3815 binding-protein-dependent transport systems inner membrane component [KO:K13890 ]
Pat9b_1271 binding-protein-dependent transport systems inner membrane component [KO:K13890 ]
Pat9b_5049 binding-protein-dependent transport systems inner membrane component [KO:K13890 ]
Pat9b_3814 binding-protein-dependent transport systems inner membrane component [KO:K13891 ]
Pat9b_1272 binding-protein-dependent transport systems inner membrane component [KO:K13891 ]
Pat9b_5331 binding-protein-dependent transport systems inner membrane component [KO:K13891 ]
Pat9b_2662 binding-protein-dependent transport systems inner membrane component [KO:K13894 ]
Pat9b_2663 binding-protein-dependent transport systems inner membrane component [KO:K13895 ]
Pat9b_1506 lipoprotein releasing system, transmembrane protein, LolC/E family [KO:K09808 ]
Pat9b_1507 lipoprotein releasing system, ATP-binding protein [KO:K09810 ] [EC:7.6.2.-]
Pat9b_0258 protein insertion ABC transporter, inner membrane subunit FtsX [KO:K09811 ]
Pat9b_0257 Type II (General) Secretory Pathway (IISP) Family protein [KO:K09812 ]
Pat9b_0428 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC [KO:K16012 ]
Pat9b_1313 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC [KO:K16012 ]
Pat9b_0427 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD [KO:K16013 ]
Pat9b_1314 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD [KO:K16013 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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