KEGG   PATHWAY: pbf00630
Entry
pbf00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Candidatus Promineifilum breve
Class
Metabolism; Carbohydrate metabolism
Pathway map
pbf00630  Glyoxylate and dicarboxylate metabolism
pbf00630

Module
pbf_M00012  Glyoxylate cycle [PATH:pbf00630]
pbf_M00621  Glycine cleavage system [PATH:pbf00630]
Other DBs
GO: 0046487 0043648
Organism
Candidatus Promineifilum breve [GN:pbf]
Gene
CFX0092_A2024  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
CFX0092_A0407  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
CFX0092_A1769  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
CFX0092_A2023  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
CFX0092_A1712  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CFX0092_A0247  citZ; Citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
CFX0092_A0816  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
CFX0092_B0457  conserved protein of unknown function [KO:K00626] [EC:2.3.1.9]
CFX0092_A1658  conserved protein of unknown function [KO:K00626] [EC:2.3.1.9]
CFX0092_A1205  conserved protein of unknown function [KO:K00626] [EC:2.3.1.9]
CFX0092_A2260  fadA; putative enzyme [KO:K00626] [EC:2.3.1.9]
CFX0092_A1936  MaoC-like dehydratase [KO:K17865] [EC:4.2.1.55]
CFX0092_A1711  Methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
CFX0092_A3268  pccB; Propionyl-CoA carboxylase beta chain [KO:K01966] [EC:6.4.1.3 2.1.3.15]
CFX0092_B0385  Methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CFX0092_B0389  yliK; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CFX0092_A0940  G040G09; Cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
CFX0092_A0850  Methylmalonyl-CoA mutase, N-terminal domain [KO:K01848] [EC:5.4.99.2]
CFX0092_A3198  conserved protein of unknown function [KO:K01091] [EC:3.1.3.18]
CFX0092_B0544  cbbL; Ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
CFX0092_A2936  pucG; Purine catabolism protein PucG [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CFX0092_A1037  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CFX0092_A1476  glyA; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CFX0092_A2229  glyA_gcvT; Aminomethyltransferase [KO:K00600] [EC:2.1.2.1]
CFX0092_A3125  gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex [KO:K00281] [EC:1.4.4.2]
CFX0092_A3310  Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
CFX0092_A1710  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CFX0092_A3126  gcvH; glycine cleavage complex lipoylprotein [KO:K02437]
CFX0092_A0545  Hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
CFX0092_A3059  kynB; Kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pbf00010  Glycolysis / Gluconeogenesis
pbf00020  Citrate cycle (TCA cycle)
pbf00030  Pentose phosphate pathway
pbf00053  Ascorbate and aldarate metabolism
pbf00071  Fatty acid degradation
pbf00230  Purine metabolism
pbf00250  Alanine, aspartate and glutamate metabolism
pbf00260  Glycine, serine and threonine metabolism
pbf00620  Pyruvate metabolism
pbf00710  Carbon fixation by Calvin cycle
pbf00750  Vitamin B6 metabolism
pbf00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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