KEGG   PATHWAY: pcin00630
Entry
pcin00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Prosopis cineraria
Class
Metabolism; Carbohydrate metabolism
Pathway map
pcin00630  Glyoxylate and dicarboxylate metabolism
pcin00630

Module
pcin_M00012  Glyoxylate cycle [PATH:pcin00630]
pcin_M00532  Photorespiration [PATH:pcin00630]
pcin_M00621  Glycine cleavage system [PATH:pcin00630]
Other DBs
GO: 0046487 0043648
Organism
Prosopis cineraria [GN:pcin]
Gene
129314511  LOW QUALITY PROTEIN: isocitrate lyase 2 [KO:K01637] [EC:4.1.3.1]
129306085  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like isoform X1 [KO:K01895] [EC:6.2.1.1]
129306123  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like isoform X1 [KO:K01895] [EC:6.2.1.1]
129292053  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
129309745  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
129320294  LOW QUALITY PROTEIN: malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
129321884  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
129309852  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
129286896  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
129293791  malate dehydrogenase, chloroplastic-like isoform X1 [KO:K00026] [EC:1.1.1.37]
129321112  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
129323197  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
129285698  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
129315510  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
129313183  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
129302495  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
129321564  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
129309650  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
129315440  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
129307496  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
129285345  acetyl-CoA acetyltransferase, cytosolic 1 isoform X1 [KO:K00626] [EC:2.3.1.9]
129303845  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
129305157  glycolate oxidase 1-like [KO:K11517] [EC:1.1.3.15]
129288136  peroxisomal (S)-2-hydroxyacid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
129288139  peroxisomal (S)-2-hydroxyacid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
129315564  glycolate oxidase 1 isoform X1 [KO:K11517] [EC:1.1.3.15]
129318256  catalase [KO:K03781] [EC:1.11.1.6]
129300030  catalase-like [KO:K03781] [EC:1.11.1.6]
129286977  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
129295469  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129288867  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129288912  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129289229  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129289230  LOW QUALITY PROTEIN: glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129289232  LOW QUALITY PROTEIN: glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129289547  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129289550  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129289651  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
129288344  glyoxylate/succinic semialdehyde reductase 2, chloroplastic [KO:K18121] [EC:1.1.1.79 1.1.1.-]
129290550  glyoxylate/succinic semialdehyde reductase 1-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
129290592  glyoxylate/succinic semialdehyde reductase 1-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
129293023  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
129286577  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
129288062  phosphoglycolate phosphatase 1A, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
55764249  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
129298701  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
129298702  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
129293139  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
129293357  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
129318191  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
129301632  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
129322369  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
129298615  LOW QUALITY PROTEIN: glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
129287538  LOW QUALITY PROTEIN: ferredoxin-dependent glutamate synthase, chloroplastic-like [KO:K00284] [EC:1.4.7.1]
129292782  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
129295483  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
129309070  glutamine synthetase leaf isozyme, chloroplastic-like [KO:K01915] [EC:6.3.1.2]
129297846  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
129303149  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
129315802  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
129292515  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
129305954  serine hydroxymethyltransferase 6-like [KO:K00600] [EC:2.1.2.1]
129307721  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
129294304  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
129320785  serine hydroxymethyltransferase 4-like isoform X1 [KO:K00600] [EC:2.1.2.1]
129322824  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
129299159  serine hydroxymethyltransferase 6-like [KO:K00600] [EC:2.1.2.1]
129285832  serine hydroxymethyltransferase 6-like [KO:K00600] [EC:2.1.2.1]
129303602  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
129302207  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
129293353  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
129293605  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
129307861  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
129321714  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
129310030  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
129311602  glycine cleavage system H protein, mitochondrial [KO:K02437]
129286671  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
129290169  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
129303195  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
129310679  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
129311618  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
129322004  uncharacterized protein LOC129322004 isoform X1 [KO:K01455] [EC:3.5.1.49]
129293080  oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pcin00010  Glycolysis / Gluconeogenesis
pcin00020  Citrate cycle (TCA cycle)
pcin00030  Pentose phosphate pathway
pcin00053  Ascorbate and aldarate metabolism
pcin00071  Fatty acid degradation
pcin00230  Purine metabolism
pcin00250  Alanine, aspartate and glutamate metabolism
pcin00260  Glycine, serine and threonine metabolism
pcin00620  Pyruvate metabolism
pcin00710  Carbon fixation by Calvin cycle
pcin00750  Vitamin B6 metabolism
pcin00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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