KEGG   PATHWAY: pcos00630
Entry
pcos00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Polynucleobacter corsicus
Class
Metabolism; Carbohydrate metabolism
Pathway map
pcos00630  Glyoxylate and dicarboxylate metabolism
pcos00630

Module
pcos_M00012  Glyoxylate cycle [PATH:pcos00630]
Other DBs
GO: 0046487 0043648
Organism
Polynucleobacter corsicus [GN:pcos]
Gene
C2747_07460  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
C2747_03815  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
C2747_06090  malate synthase G [KO:K01638] [EC:2.3.3.9]
C2747_05835  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
C2747_04995  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
C2747_05800  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
C2747_05380  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
C2747_05300  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
C2747_05285  3-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
C2747_05230  accC; acetyl-CoA carboxylase biotin carboxylase subunit [KO:K01965] [EC:6.4.1.3]
C2747_05225  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
C2747_05215  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
C2747_08980  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
C2747_08985  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
C2747_08990  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
C2747_07820  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
C2747_07785  HAD-IIIA family hydrolase [KO:K01091] [EC:3.1.3.18]
C2747_02270  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C2747_01450  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
C2747_04865  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C2747_05935  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C2747_00130  gcvH; glycine cleavage system protein GcvH [KO:K02437]
C2747_05480  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
C2747_05485  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
C2747_05490  glxR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
C2747_09450  glycerate kinase [KO:K11529] [EC:2.7.1.165]
C2747_06265  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
C2747_03850  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
C2747_06680  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
C2747_03845  NAD(P)H-dependent oxidoreductase subunit E [KO:K22515] [EC:1.17.1.9]
C2747_06675  4Fe-4S dicluster domain-containing protein [KO:K00124]
C2747_06665  formate dehydrogenase subunit gamma [KO:K00127]
C2747_03755  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
C2747_02435  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
C2747_02440  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
C2747_02445  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pcos00010  Glycolysis / Gluconeogenesis
pcos00020  Citrate cycle (TCA cycle)
pcos00030  Pentose phosphate pathway
pcos00053  Ascorbate and aldarate metabolism
pcos00071  Fatty acid degradation
pcos00230  Purine metabolism
pcos00250  Alanine, aspartate and glutamate metabolism
pcos00260  Glycine, serine and threonine metabolism
pcos00620  Pyruvate metabolism
pcos00710  Carbon fixation by Calvin cycle
pcos00750  Vitamin B6 metabolism
pcos00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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