KEGG   PATHWAY: pdp04146
Entry
pdp04146                    Pathway                                
Name
Peroxisome - Penicillium digitatum
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
pdp04146  Peroxisome
pdp04146

Other DBs
GO: 0005777
Organism
Penicillium digitatum [GN:pdp]
Gene
PDIP_34540  Peroxin 16 [KO:K13335]
PDIP_51330  Peroxin 3 [KO:K13336]
PDIP_74640  Peroxin 19 [KO:K13337]
PDIP_64550  Peroxin-1 [KO:K13338]
PDIP_06770  Peroxisomal biogenesis factor 6 [KO:K13339]
PDIP_31730  Peroxin 7 [KO:K13341]
PDIP_03870  Peroxin-5 [KO:K13342]
PDIP_28820  Peroxisomal membrane anchor protein (Pex14), putative [KO:K13343]
PDIP_03960  Peroxin 13 [KO:K13344]
PDIP_37900  Peroxin 12 [KO:K13345]
PDIP_82430  Peroxin 10 [KO:K13346]
PDIP_73250  Peroxisome biosynthesis protein (Peroxin-2), putative [KO:K06664]
PDIP_02340  Peroxisomal membrane protein (PmpP24), putative [KO:K13350]
PDIP_26160  Peroxisomal membrane protein Pmp47, putative [KO:K13354]
PDIP_54180  Isopenicillin N-CoA epimerase, putative [KO:K01796] [EC:5.1.99.4]
PDIP_47340  Fatty-acyl coenzyme A oxidase (Pox1), putative [KO:K00232] [EC:1.3.3.6]
PDIP_14030  Sterol carrier protein, putative [KO:K08764] [EC:2.3.1.176]
PDIP_82640  3-ketoacyl-CoA thiolase (POT1), putative [KO:K07513] [EC:2.3.1.16]
PDIP_33280  hypothetical protein [KO:K07513] [EC:2.3.1.16]
PDIP_10850  Peroxisomal 3-ketoacyl-coA thiolase (Kat1), putative [KO:K07513] [EC:2.3.1.16]
PDIP_26950  hypothetical protein [KO:K07513] [EC:2.3.1.16]
PDIP_52890  Oxidoreductase, short-chain dehydrogenase/reductase family [KO:K13237] [EC:1.3.1.124]
PDIP_24360  Enoyl-CoA hydratase/isomerase family protein [KO:K12663] [EC:5.3.3.21]
PDIP_20420  Peroxisomal ABC transporter (PXA1), putative [KO:K15628] [EC:7.6.2.4]
PDIP_27990  ABC transporter [KO:K15628] [EC:7.6.2.4]
PDIP_64750  Fatty acid activator Faa4, putative [KO:K01897] [EC:6.2.1.3]
PDIP_24640  AMP-binding enzyme, putative [KO:K01897] [EC:6.2.1.3]
PDIP_17470  Peroxisomal D3,D2-enoyl-CoA isomerase [KO:K13239] [EC:5.3.3.8]
PDIP_49000  NADH pyrophosphatase, putative [KO:K03426] [EC:3.6.1.22]
PDIP_89090  Carnitine acetyl transferase [KO:K00624] [EC:2.3.1.7]
PDIP_27300  Carnitine acetyl transferase [KO:K00624] [EC:2.3.1.7]
PDIP_84920  hypothetical protein [KO:K13356] [EC:1.2.1.84]
PDIP_03460  hypothetical protein [KO:K13356] [EC:1.2.1.84]
PDIP_16110  Mevalonate kinase [KO:K00869] [EC:2.7.1.36]
PDIP_40990  Aminotransferase, class V, putative [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
PDIP_60930  D-amino acid oxidase [KO:K00273] [EC:1.4.3.3]
PDIP_81590  FAD dependent oxidoreductase superfamily [KO:K00273] [EC:1.4.3.3]
PDIP_08750  Isocitrate dehydrogenase [KO:K00031] [EC:1.1.1.42]
PDIP_28740  Fructosyl amino acid oxidasesarcosine oxidase, putative [KO:K00306] [EC:1.5.3.1 1.5.3.7]
PDIP_70150  hypothetical protein [KO:K00306] [EC:1.5.3.1 1.5.3.7]
PDIP_46930  hypothetical protein [KO:K00306] [EC:1.5.3.1 1.5.3.7]
PDIP_07830  hypothetical protein [KO:K00306] [EC:1.5.3.1 1.5.3.7]
PDIP_89190  Hydroxymethylglutaryl-CoA lyase [KO:K01640] [EC:4.1.3.4]
PDIP_05940  Catalase [KO:K03781] [EC:1.11.1.6]
PDIP_15410  Spore-specific catalase CatA [KO:K03781] [EC:1.11.1.6]
PDIP_67580  Catalase B [KO:K03781] [EC:1.11.1.6]
PDIP_63740  Catalase [KO:K03781] [EC:1.11.1.6]
PDIP_43290  AhpC/TSA family protein [KO:K11187] [EC:1.11.1.24]
PDIP_70880  Fe superoxide dismutase, putative [KO:K04564] [EC:1.15.1.1]
PDIP_66470  Superoxide dismutase [KO:K04564] [EC:1.15.1.1]
PDIP_43140  Superoxide dismutase [KO:K04564] [EC:1.15.1.1]
PDIP_33700  Xanthine dehydrogenase HxA, putative [KO:K00106] [EC:1.17.1.4 1.17.3.2]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
pdp00071  Fatty acid degradation
pdp00230  Purine metabolism
pdp00564  Glycerophospholipid metabolism
pdp00565  Ether lipid metabolism
pdp00900  Terpenoid backbone biosynthesis
KO pathway
ko04146   
LinkDB

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