Entry |
|
Name |
Pyrimidine metabolism - Pseudomonas fluorescens SBW25 |
Class |
Metabolism; Nucleotide metabolism
|
Pathway map |
|
Module |
pfs_M00046 | Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pfs00240] |
pfs_M00053 | Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfs00240] |
|
Other DBs |
|
Organism |
Pseudomonas fluorescens SBW25 [GN: pfs]
|
Gene |
PFLU_5265 | Carbamoyl-phosphate synthase large chain (EC (Carbamoyl-phosphate synthetase ammonia chain) [KO:K01955] [EC:6.3.5.5] |
PFLU_5266 | carA; Carbamoyl-phosphate synthase small chain (EC (Carbamoyl-phosphate synthetase glutamine chain) [KO:K01956] [EC:6.3.5.5] |
PFLU_5758 | pyrB; Aspartate carbamoyltransferase (EC (Aspartate transcarbamylase) (ATCase) [KO:K00609] [EC:2.1.3.2] |
PFLU_4603 | Dihydroorotate dehydrogenase (quinone) (EC (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase) [KO:K00254] [EC:1.3.5.2] |
PFLU_1851 | pyrF; Orotidine 5'-phosphate decarboxylase (EC (OMP decarboxylase) (OMPDCase) (OMPdecase) [KO:K01591] [EC:4.1.1.23] |
PFLU_1272 | pyrH; Uridylate kinase (UK) (EC (Uridine monophosphate kinase) (UMP kinase) (UMPK) [KO:K09903] [EC:2.7.4.22] |
PFLU_5061 | Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC (Nucleoside-2-P kinase) [KO:K00940] [EC:2.7.4.6] |
PFLU_4399 | Pyrimidine/purine nucleoside phosphorylase (EC (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (EC (Inosine phosphorylase) (Thymidine phosphorylase) (EC (Uridine phosphorylase) (EC (Xanthosine phosphorylase) [KO:K09913] [EC:2.4.2.1 2.4.2.2] |
PFLU_0899 | upp; Uracil phosphoribosyltransferase (EC (UMP pyrophosphorylase) (UPRTase) [KO:K00761] [EC:2.4.2.9] |
PFLU_5757 | pyrR; Bifunctional protein [pyrimidine operon regulatory protein uracil phosphoribosyltransferase] (EC [KO:K02825] [EC:2.4.2.9] |
PFLU_5984 | dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC (dUTP pyrophosphatase) [KO:K01520] [EC:3.6.1.23] |
|
Compound |
C00119 | 5-Phospho-alpha-D-ribose 1-diphosphate |
C00438 | N-Carbamoyl-L-aspartate |
C00672 | 2-Deoxy-D-ribose 1-phosphate |
C01168 | Pseudouridine 5'-phosphate |
C01205 | (R)-3-Amino-2-methylpropanoate |
C03997 | 5-Hydroxymethyldeoxycytidylate |
C06198 | P1,P4-Bis(5'-uridyl) tetraphosphate |
C11038 | 2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate |
C11039 | 2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate |
C15607 | 3-Oxo-3-ureidopropanoate |
C20231 | (Z)-3-Ureidoacrylate peracid |
C20249 | (Z)-3-Peroxyaminoacrylate |
C20846 | 3-Oxo-3-ureidoisobutyrate |
C21029 | (R)-3-Ureidoisobutyrate |
|
Related pathway |
pfs00250 | Alanine, aspartate and glutamate metabolism |
pfs00280 | Valine, leucine and isoleucine degradation |
|
KO pathway |
|
LinkDB |
|