KEGG   PATHWAY: pfu00970
Entry
pfu00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Pyrococcus furiosus DSM 3638
Class
Genetic Information Processing; Translation
Pathway map
pfu00970  Aminoacyl-tRNA biosynthesis
pfu00970

Organism
Pyrococcus furiosus DSM 3638 [GN:pfu]
Gene
PF_t018  tRNA-Ala [KO:K14218]
PF_t020  tRNA-Ala [KO:K14218]
PF_t003  tRNA-Ala [KO:K14218]
PF_t004  tRNA-Arg [KO:K14219]
PF_t017  tRNA-Arg [KO:K14219]
PF_t045  tRNA-Arg [KO:K14219]
PF_t009  tRNA-Arg [KO:K14219]
PF_t013  tRNA-Arg [KO:K14219]
PF_t027  tRNA-Asn [KO:K14220]
PF_t041  tRNA-Asp [KO:K14221]
PF_t031  tRNA-Cys [KO:K14222]
PF_t008  tRNA-Gln [KO:K14223]
PF_t011  tRNA-Gln [KO:K14223]
PF_t006  tRNA-Glu [KO:K14224]
PF_t015  tRNA-Glu [KO:K14224]
PF_t001  tRNA-Gly [KO:K14225]
PF_t024  tRNA-Gly [KO:K14225]
PF_t010  tRNA-Gly [KO:K14225]
PF_t046  tRNA-His [KO:K14226]
PF_t016  tRNA-Ile [KO:K14227]
PF_t034  tRNA-Leu [KO:K14228]
PF_t007  tRNA-Leu [KO:K14228]
PF_t019  tRNA-Leu [KO:K14228]
PF_t039  tRNA-Leu [KO:K14228]
PF_t025  tRNA-Leu [KO:K14228]
PF_t030  tRNA-Lys [KO:K14229]
PF_t012  tRNA-Lys [KO:K14229]
PF_t026  tRNA-Met [KO:K14230]
PF_t005  tRNA-Met [KO:K14230]
PF_t029  tRNA-Met [KO:K14230]
PF_t002  tRNA-Phe [KO:K14231]
PF_t038  tRNA-Pro [KO:K14232]
PF_t036  tRNA-Pro [KO:K14232]
PF_t044  tRNA-Pro [KO:K14232]
PF_t028  tRNA-Ser [KO:K14233]
PF_t014  tRNA-Ser [KO:K14233]
PF_t032  tRNA-Ser [KO:K14233]
PF_t040  tRNA-Ser [KO:K14233]
PF_t035  tRNA-Thr [KO:K14234]
PF_t033  tRNA-Thr [KO:K14234]
PF_t037  tRNA-Thr [KO:K14234]
PF_t022  tRNA-Trp [KO:K14235]
PF_t023  tRNA-Tyr [KO:K14236]
PF_t042  tRNA-Val [KO:K14237]
PF_t021  tRNA-Val [KO:K14237]
PF_t043  tRNA-Val [KO:K14237]
PF1753  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
PF1461  l-asparaginase (l-asparagine amidohydrolase) asparaginase [KO:K09482] [EC:6.3.5.7]
PF1462  pet112-like protein [KO:K03330] [EC:6.3.5.7]
PF0270  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
PF0086  partial alanyl-tRNA synthetase matches COOH terminus [KO:K01872] [EC:6.1.1.7]
PF0185  partial alanyl-tRNA synthetase matches COOH terminus half [KO:K01872] [EC:6.1.1.7]
PF0428  partial alanyl-tRNA synthetase matches COOH terminus [KO:K01872] [EC:6.1.1.7]
PF0869  aspartyl tRNA synthetase [KO:K22503] [EC:6.1.1.12]
PF0155  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
PF1951  partial asparaginyl-tRNA synthetase matches COOH terminus [KO:K01893] [EC:6.1.1.22]
PF1627  glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
PF1351  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
PF1204  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
PF1024  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
PF1030  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
PF0290  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
PF0890  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
PF1096  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
PF0135  lysyl-tRNA synthetase [KO:K04566] [EC:6.1.1.6]
PF1380  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
PF1293  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
PF0264  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
PF0989  phenylalanyl-tRNA synthetase, alpha-subunit [KO:K01889] [EC:6.1.1.20]
PF0990  phenylalanyl-tRNA synthetase beta-chain [KO:K01890] [EC:6.1.1.20]
PF0862  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
PF0241  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
pfu00250  Alanine, aspartate and glutamate metabolism
pfu00260  Glycine, serine and threonine metabolism
pfu00270  Cysteine and methionine metabolism
pfu00290  Valine, leucine and isoleucine biosynthesis
pfu00300  Lysine biosynthesis
pfu00330  Arginine and proline metabolism
pfu00340  Histidine metabolism
pfu00380  Tryptophan metabolism
pfu00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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