KEGG   PATHWAY: poq00630
Entry
poq00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Polymorphobacter sp. PAMC 29334
Class
Metabolism; Carbohydrate metabolism
Pathway map
poq00630  Glyoxylate and dicarboxylate metabolism
poq00630

Module
poq_M00012  Glyoxylate cycle [PATH:poq00630]
poq_M00621  Glycine cleavage system [PATH:poq00630]
poq_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:poq00630]
Other DBs
GO: 0046487 0043648
Organism
Polymorphobacter sp. PAMC 29334 [GN:poq]
Gene
KZX46_07765  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
KZX46_04560  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KZX46_07775  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
KZX46_17200  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
KZX46_14590  citrate synthase [KO:K01647] [EC:2.3.3.1]
KZX46_19395  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
KZX46_04050  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KZX46_04230  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KZX46_08015  acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KZX46_08045  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KZX46_09345  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KZX46_11315  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KZX46_15030  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KZX46_19010  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KZX46_07750  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
KZX46_15165  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
KZX46_13485  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
KZX46_13495  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
KZX46_10020  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KZX46_19585  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
KZX46_19590  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
KZX46_19595  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
KZX46_18120  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
KZX46_20075  catalase [KO:K03781] [EC:1.11.1.6]
KZX46_00190  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
KZX46_01145  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
KZX46_03350  catalase [KO:K03781] [EC:1.11.1.6]
KZX46_08605  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
KZX46_15505  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
KZX46_13505  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
KZX46_16425  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
KZX46_11600  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KZX46_17935  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
KZX46_16925  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KZX46_05900  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
KZX46_05905  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
KZX46_05885  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
KZX46_15795  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KZX46_17165  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KZX46_05890  gcvH; glycine cleavage system protein GcvH [KO:K02437]
KZX46_16470  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
KZX46_17975  kinase [KO:K15918] [EC:2.7.1.31]
KZX46_05435  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
poq00010  Glycolysis / Gluconeogenesis
poq00020  Citrate cycle (TCA cycle)
poq00030  Pentose phosphate pathway
poq00053  Ascorbate and aldarate metabolism
poq00071  Fatty acid degradation
poq00230  Purine metabolism
poq00250  Alanine, aspartate and glutamate metabolism
poq00260  Glycine, serine and threonine metabolism
poq00620  Pyruvate metabolism
poq00710  Carbon fixation by Calvin cycle
poq00750  Vitamin B6 metabolism
poq00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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