KEGG   PATHWAY: ppla00630
Entry
ppla00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Planococcus plakortidis
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppla00630  Glyoxylate and dicarboxylate metabolism
ppla00630

Module
ppla_M00012  Glyoxylate cycle [PATH:ppla00630]
ppla_M00621  Glycine cleavage system [PATH:ppla00630]
Other DBs
GO: 0046487 0043648
Organism
Planococcus plakortidis [GN:ppla]
Gene
BBI15_06665  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BBI15_08775  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
BBI15_02085  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BBI15_02150  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
BBI15_06670  malate synthase A [KO:K01638] [EC:2.3.3.9]
BBI15_02290  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BBI15_12550  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
BBI15_04175  citrate synthase [KO:K01647] [EC:2.3.3.1]
BBI15_02280  citrate synthase [KO:K01647] [EC:2.3.3.1]
BBI15_03910  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
BBI15_04950  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BBI15_08345  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BBI15_02295  enoyl-CoA hydratase [KO:K17865] [EC:4.2.1.55]
BBI15_03530  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
BBI15_03535  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BBI15_03505  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BBI15_03510  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BBI15_13535  catalase [KO:K03781] [EC:1.11.1.6]
BBI15_08925  catalase HPII [KO:K03781] [EC:1.11.1.6]
BBI15_09700  catalase [KO:K03781] [EC:1.11.1.6]
BBI15_08765  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
BBI15_07375  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
BBI15_09940  nucleosidase [KO:K01091] [EC:3.1.3.18]
BBI15_05005  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
BBI15_08230  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BBI15_03355  glycine dehydrogenase (aminomethyl-transferring) [KO:K00282] [EC:1.4.4.2]
BBI15_03360  glycine dehydrogenase (aminomethyl-transferring) [KO:K00283] [EC:1.4.4.2]
BBI15_03350  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
BBI15_10750  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BBI15_03485  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BBI15_05880  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BBI15_01440  glycine cleavage system protein H [KO:K02437]
BBI15_16185  glycerate kinase [KO:K00865] [EC:2.7.1.165]
BBI15_10820  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
BBI15_00210  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BBI15_00925  arylformamidase [KO:K07130] [EC:3.5.1.9]
BBI15_13400  acetamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ppla00010  Glycolysis / Gluconeogenesis
ppla00020  Citrate cycle (TCA cycle)
ppla00030  Pentose phosphate pathway
ppla00053  Ascorbate and aldarate metabolism
ppla00071  Fatty acid degradation
ppla00230  Purine metabolism
ppla00250  Alanine, aspartate and glutamate metabolism
ppla00260  Glycine, serine and threonine metabolism
ppla00620  Pyruvate metabolism
ppla00710  Carbon fixation by Calvin cycle
ppla00750  Vitamin B6 metabolism
ppla00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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