KEGG   PATHWAY: put00630
Entry
put00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pusillimonas sp. T7-7
Class
Metabolism; Carbohydrate metabolism
Pathway map
put00630  Glyoxylate and dicarboxylate metabolism
put00630

Module
put_M00012  Glyoxylate cycle [PATH:put00630]
put_M00621  Glycine cleavage system [PATH:put00630]
Other DBs
GO: 0046487 0043648
Organism
Pusillimonas sp. T7-7 [GN:put]
Gene
PT7_1448  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
PT7_0129  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PT7_1650  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PT7_1665  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
PT7_2988  malate synthase G [KO:K01638] [EC:2.3.3.9]
PT7_0418  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
PT7_2935  citrate synthase [KO:K01647] [EC:2.3.3.1]
PT7_0425  type II citrate synthase [KO:K01647] [EC:2.3.3.1]
PT7_2249  citrate synthase [KO:K01647] [EC:2.3.3.1]
PT7_2612  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
PT7_0408  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
PT7_3027  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
PT7_0998  beta-ketothiolase [KO:K00626] [EC:2.3.1.9]
PT7_2883  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
PT7_0495  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
PT7_0441  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
PT7_1533  glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
PT7_1532  glycolate oxidase FAD binding subunit [KO:K11472] [EC:1.1.99.14]
PT7_1531  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
PT7_2928  catalase [KO:K03781] [EC:1.11.1.6]
PT7_1605  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein [KO:K00015] [EC:1.1.1.26]
PT7_3087  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
PT7_1169  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
PT7_2532  putative phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
PT7_1706  hydrolase [KO:K01091] [EC:3.1.3.18]
PT7_1574  serine-glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
PT7_1194  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
PT7_3541  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
PT7_2153  glycine cleavage system P protein [KO:K00281] [EC:1.4.4.2]
PT7_2155  glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
PT7_2789  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PT7_1009  mercuric ion reductase [KO:K00382] [EC:1.8.1.4]
PT7_1018  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PT7_0839  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PT7_0431  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PT7_2154  glycine cleavage system H protein [KO:K02437]
PT7_1958  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
PT7_1168  hypothetical protein [KO:K00865] [EC:2.7.1.165]
PT7_1208  3-isopropylmalate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
PT7_1553  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
PT7_0393  2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
PT7_2103  NAD-dependent formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
PT7_2101  NAD-dependent formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
PT7_2349  nitrate reductase, catalytic subunit [KO:K00123] [EC:1.17.1.9]
PT7_2350  NAD-dependent formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
PT7_2100  NAD-dependent formate dehydrogenase beta subunit [KO:K00124]
PT7_2351  formate dehydrogenase, beta subunit [KO:K00124]
PT7_2099  formate dehydrogenase subunit gamma [KO:K00127]
PT7_2352  formate dehydrogenase, cytochrome b556 [KO:K00127]
PT7_2767  putative esterase [KO:K01432] [EC:3.5.1.9]
PT7_2721  hypothetical protein [KO:K01432] [EC:3.5.1.9]
PT7_2035  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
put00010  Glycolysis / Gluconeogenesis
put00020  Citrate cycle (TCA cycle)
put00030  Pentose phosphate pathway
put00053  Ascorbate and aldarate metabolism
put00071  Fatty acid degradation
put00230  Purine metabolism
put00250  Alanine, aspartate and glutamate metabolism
put00260  Glycine, serine and threonine metabolism
put00620  Pyruvate metabolism
put00710  Carbon fixation by Calvin cycle
put00750  Vitamin B6 metabolism
put00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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