KEGG   PATHWAY: qsa00630
Entry
qsa00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Quillaja saponaria (soapbark tree)
Class
Metabolism; Carbohydrate metabolism
Pathway map
qsa00630  Glyoxylate and dicarboxylate metabolism
qsa00630

Module
qsa_M00012  Glyoxylate cycle [PATH:qsa00630]
qsa_M00532  Photorespiration [PATH:qsa00630]
qsa_M00621  Glycine cleavage system [PATH:qsa00630]
Other DBs
GO: 0046487 0043648
Organism
Quillaja saponaria (soapbark tree) [GN:qsa]
Gene
O6P43_000589  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
O6P43_028687  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
O6P43_009789  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
O6P43_006129  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
O6P43_003628  CoA ligase [KO:K01913] [EC:6.2.1.1 6.2.1.2]
O6P43_021825  CoA ligase [KO:K01913] [EC:6.2.1.1 6.2.1.2]
O6P43_022577  malate synthase [KO:K01638] [EC:2.3.3.9]
O6P43_027000  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
O6P43_003207  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
O6P43_021417  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
O6P43_033960  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_001022  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_001961  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_029164  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_012476  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_012743  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_031704  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_031912  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_022854  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
O6P43_001296  Citrate synthase [KO:K01647] [EC:2.3.3.1]
O6P43_029469  Citrate synthase [KO:K01647] [EC:2.3.3.1]
O6P43_013765  Citrate synthase [KO:K01647] [EC:2.3.3.1]
O6P43_021110  Citrate synthase [KO:K01647] [EC:2.3.3.1]
O6P43_024910  Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
O6P43_000577  Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
O6P43_028676  Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
O6P43_033567  Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
O6P43_012053  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
O6P43_020710  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
O6P43_014458  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
O6P43_031388  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
O6P43_027515  Peroxisomal (S)-2-hydroxy-acid oxidase [KO:K11517] [EC:1.1.3.15]
O6P43_027517  Peroxisomal (S)-2-hydroxy-acid oxidase [KO:K11517] [EC:1.1.3.15]
O6P43_001157  Peroxisomal (S)-2-hydroxy-acid oxidase [KO:K11517] [EC:1.1.3.15]
O6P43_029293  Peroxisomal (S)-2-hydroxy-acid oxidase [KO:K11517] [EC:1.1.3.15]
O6P43_012987  Peroxisomal (S)-2-hydroxy-acid oxidase [KO:K11517] [EC:1.1.3.15]
O6P43_016364  Catalase [KO:K03781] [EC:1.11.1.6]
O6P43_017517  Glyoxylate/hydroxypyruvate reductase hpr3-like protein [KO:K15919] [EC:1.1.1.79 1.1.1.81]
O6P43_017522  Glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
O6P43_027135  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
O6P43_027137  Glyoxylate/hydroxypyruvate reductase hpr3-like protein [KO:K15919] [EC:1.1.1.79 1.1.1.81]
O6P43_017049  Glyoxylate/succinic semialdehyde reductase [KO:K18121] [EC:1.1.1.79 1.1.1.-]
O6P43_017063  Glyoxylate/succinic semialdehyde reductase [KO:K18121] [EC:1.1.1.79 1.1.1.-]
O6P43_017068  Glyoxylate/succinic semialdehyde reductase [KO:K18121] [EC:1.1.1.79 1.1.1.-]
O6P43_027632  Glyoxylate/succinic semialdehyde reductase 2 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
O6P43_002131  Glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
O6P43_011446  Glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
O6P43_007785  Phosphoglycolate phosphatase [KO:K19269] [EC:3.1.3.18 3.1.3.48]
O6P43_031392  Phosphoglycolate phosphatase [KO:K19269] [EC:3.1.3.18 3.1.3.48]
O6P43_034901  Ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
O6P43_035108  Ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
O6P43_035328  Ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
O6P43_035630  Ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
O6P43_032332  Ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
O6P43_009282  Ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
O6P43_025712  Ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
O6P43_002847  Ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
O6P43_005611  Ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
O6P43_022323  Ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
O6P43_032745  Ribulose bisphosphate carboxylase (small chain) family protein [KO:K01602] [EC:4.1.1.39]
O6P43_032746  Ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
O6P43_021002  alanine:glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
O6P43_014731  alanine:glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
O6P43_025253  Alanine aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
O6P43_033206  Alanine aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
O6P43_006374  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
O6P43_008463  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O6P43_003455  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O6P43_020570  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O6P43_014276  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O6P43_021647  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O6P43_005220  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O6P43_032321  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O6P43_034395  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_023578  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_023579  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_025184  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_002603  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_019079  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_012213  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_019537  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_019698  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_031509  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_015248  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_015923  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_033297  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O6P43_019093  Glycine cleavage system P protein [KO:K00281] [EC:1.4.4.2]
O6P43_015905  Glycine cleavage system P protein [KO:K00281] [EC:1.4.4.2]
O6P43_006467  Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
O6P43_011937  Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
O6P43_003631  Dihydrolipoyl dehydrogenase-like protein [KO:K00382] [EC:1.8.1.4]
O6P43_003717  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
O6P43_021830  Dihydrolipoyl dehydrogenase-like protein [KO:K00382] [EC:1.8.1.4]
O6P43_021907  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
O6P43_033986  Glycine cleavage system H protein [KO:K02437]
O6P43_024467  Glycine cleavage system H protein [KO:K02437]
O6P43_013285  Glycine cleavage system H protein [KO:K02437]
O6P43_018087  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
O6P43_008982  Formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
O6P43_004613  Formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
O6P43_034081  putative formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
O6P43_024564  Formamidase [KO:K01455] [EC:3.5.1.49]
O6P43_008204  CoA ligase [KO:K22133] [EC:6.2.1.8]
O6P43_004296  CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
qsa00010  Glycolysis / Gluconeogenesis
qsa00020  Citrate cycle (TCA cycle)
qsa00030  Pentose phosphate pathway
qsa00053  Ascorbate and aldarate metabolism
qsa00071  Fatty acid degradation
qsa00230  Purine metabolism
qsa00250  Alanine, aspartate and glutamate metabolism
qsa00260  Glycine, serine and threonine metabolism
qsa00620  Pyruvate metabolism
qsa00710  Carbon fixation by Calvin cycle
qsa00750  Vitamin B6 metabolism
qsa00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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