KEGG   PATHWAY: raw00630
Entry
raw00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhizobium anhuiense bv. trifolii
Class
Metabolism; Carbohydrate metabolism
Pathway map
raw00630  Glyoxylate and dicarboxylate metabolism
raw00630

Module
raw_M00012  Glyoxylate cycle [PATH:raw00630]
raw_M00621  Glycine cleavage system [PATH:raw00630]
raw_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:raw00630]
Other DBs
GO: 0046487 0043648
Organism
Rhizobium anhuiense bv. trifolii [GN:raw]
Gene
NE851_13820  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
NE851_30780  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
NE851_09650  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NE851_09995  malate synthase G [KO:K01638] [EC:2.3.3.9]
NE851_31495  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NE851_20130  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
NE851_21430  citrate synthase [KO:K01647] [EC:2.3.3.1]
NE851_21435  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
NE851_08705  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
NE851_00490  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
NE851_32780  thiolase family protein [KO:K00626] [EC:2.3.1.9]
NE851_09170  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
NE851_12945  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
NE851_09165  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
NE851_18370  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
NE851_21695  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
NE851_21725  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
NE851_04135  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
NE851_14270  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
NE851_14275  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
NE851_14280  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
NE851_19440  catalase [KO:K03781] [EC:1.11.1.6]
NE851_10705  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
NE851_34245  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
NE851_10940  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
NE851_21740  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
NE851_22400  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
NE851_14470  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
NE851_20825  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NE851_26185  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
NE851_27230  glutamine synthetase beta-grasp domain-containing protein [KO:K01915] [EC:6.3.1.2]
NE851_06970  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NE851_13775  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
NE851_16950  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
NE851_17885  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NE851_07080  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NE851_21780  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
NE851_21770  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
NE851_05330  DUF1989 domain-containing protein [KO:K00605] [EC:2.1.2.10]
NE851_05395  aminomethyltransferase family protein [KO:K00605] [EC:2.1.2.10]
NE851_20190  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NE851_31445  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NE851_00515  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NE851_21775  gcvH; glycine cleavage system protein GcvH [KO:K02437]
NE851_28545  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
NE851_00260  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
NE851_22750  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
NE851_28450  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
NE851_06485  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
NE851_19345  glycerate kinase [KO:K11529] [EC:2.7.1.165]
NE851_08200  glycerate kinase [KO:K11529] [EC:2.7.1.165]
NE851_14850  glycerate kinase [KO:K11529] [EC:2.7.1.165]
NE851_07980  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
NE851_34230  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
NE851_14855  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
NE851_30065  2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NE851_31245  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
NE851_31255  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
NE851_31260  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
NE851_31265  formate dehydrogenase subunit gamma [KO:K00127]
NE851_05400  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NE851_32405  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NE851_11170  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NE851_06080  formamidase [KO:K01455] [EC:3.5.1.49]
NE851_03085  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
raw00010  Glycolysis / Gluconeogenesis
raw00020  Citrate cycle (TCA cycle)
raw00030  Pentose phosphate pathway
raw00053  Ascorbate and aldarate metabolism
raw00071  Fatty acid degradation
raw00230  Purine metabolism
raw00250  Alanine, aspartate and glutamate metabolism
raw00260  Glycine, serine and threonine metabolism
raw00620  Pyruvate metabolism
raw00710  Carbon fixation by Calvin cycle
raw00750  Vitamin B6 metabolism
raw00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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