KEGG   PATHWAY: rom02024
Entry
rom02024                    Pathway                                
Name
Quorum sensing - Roseovarius faecimaris
Description
Quorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal molecules called autoinducers (AIs) that increase in concentration as a function of cell density. The most commonly studied AIs belong to one of the following three categories: acylated homoserine lactones, also referred to as AI-1, used by Gram-negative bacteria; peptide signals, used by Gram-positive bacteria; and AI-2, used by both Gram-negative and Gram-positive bacteria. QS can be divided into at least 4 steps: production of AIs by the bacterial cell; release of AIs, either actively or passively, into the surrounding environment; recognition of AIs by specific receptors; and leading to changes in gene regulation once they exceed a threshold concentration. The processes controlled by QS include virulence, competence, conjugation, antibiotic production, motility, sporulation, and biofilm formation.
Class
Cellular Processes; Cellular community - prokaryotes
Pathway map
rom02024  Quorum sensing
rom02024

Other DBs
GO: 0009372
Organism
Roseovarius faecimaris [GN:rom]
Gene
EI983_09135  RNA chaperone Hfq [KO:K03666]
EI983_07355  anthranilate synthase component I [KO:K01657] [EC:4.1.3.27]
EI983_07330  aminodeoxychorismate/anthranilate synthase component II [KO:K01658] [EC:4.1.3.27]
EI983_02570  N-acyl-L-homoserine lactone synthetase [KO:K13061] [EC:2.3.1.184]
EI983_09855  3-deoxy-7-phosphoheptulonate synthase class II [KO:K01626] [EC:2.5.1.54]
EI983_09000  LuxR family transcriptional regulator [KO:K07782]
EI983_03040  autoinducer synthase [KO:K20249] [EC:2.3.1.184]
EI983_03045  LuxR family transcriptional regulator [KO:K25873]
EI983_17910  extracellular solute-binding protein [KO:K02055]
EI983_01855  ABC transporter substrate-binding protein [KO:K02055]
EI983_17900  ABC transporter permease [KO:K02053]
EI983_01870  ABC transporter permease [KO:K02053]
EI983_17905  ABC transporter permease [KO:K02054]
EI983_01865  ABC transporter permease [KO:K02054]
EI983_17915  ABC transporter ATP-binding protein [KO:K02052]
EI983_01860  ABC transporter ATP-binding protein [KO:K02052]
EI983_12640  ABC transporter substrate-binding protein [KO:K01999]
EI983_09875  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
EI983_01095  ABC transporter permease [KO:K01999]
EI983_01290  ABC transporter substrate-binding protein [KO:K01999]
EI983_16060  ABC transporter substrate-binding protein [KO:K01999]
EI983_16310  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
EI983_01835  ABC transporter substrate-binding protein [KO:K01999]
EI983_08855  ABC transporter substrate-binding protein [KO:K01999]
EI983_09390  ABC transporter substrate-binding protein [KO:K01999]
EI983_12645  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_09895  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_01080  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_01295  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_16055  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_16305  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_01825  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_09395  branched-chain amino acid ABC transporter permease [KO:K01997]
EI983_01090  branched-chain amino acid ABC transporter permease [KO:K01998]
EI983_01300  branched-chain amino acid ABC transporter permease [KO:K01998]
EI983_01830  branched-chain amino acid ABC transporter permease [KO:K01998]
EI983_09900  branched-chain amino acid ABC transporter permease [KO:K01998]
EI983_16050  branched-chain amino acid ABC transporter permease [KO:K01998]
EI983_16300  branched-chain amino acid ABC transporter permease [KO:K01998]
EI983_12650  branched-chain amino acid ABC transporter permease [KO:K01998]
EI983_12630  ABC transporter ATP-binding protein [KO:K01995]
EI983_09880  ABC transporter ATP-binding protein [KO:K01995]
EI983_01075  ABC transporter ATP-binding protein [KO:K01995]
EI983_01305  ABC transporter ATP-binding protein [KO:K01995]
EI983_16045  ABC transporter ATP-binding protein [KO:K01995]
EI983_09405  ABC transporter ATP-binding protein [KO:K01995]
EI983_16295  ABC transporter ATP-binding protein [KO:K01995]
EI983_01815  ABC transporter ATP-binding protein [KO:K01995]
EI983_01100  ABC transporter ATP-binding protein [KO:K01996]
EI983_01310  ABC transporter ATP-binding protein [KO:K01996]
EI983_09410  ABC transporter ATP-binding protein [KO:K01996]
EI983_01820  ABC transporter ATP-binding protein [KO:K01996]
EI983_09885  ABC transporter ATP-binding protein [KO:K01996]
EI983_16040  ABC transporter ATP-binding protein [KO:K01996]
EI983_16290  ABC transporter ATP-binding protein [KO:K01996]
EI983_12635  ABC transporter ATP-binding protein [KO:K01996]
EI983_12970  DUF11 domain-containing protein [KO:K20276]
EI983_01065  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
EI983_12665  acyl-CoA synthetase [KO:K01897] [EC:6.2.1.3]
EI983_16355  Crp/Fnr family transcriptional regulator [KO:K10914]
EI983_13710  transcriptional repressor [KO:K09823]
EI983_02070  ribA; GTP cyclohydrolase II [KO:K01497] [EC:3.5.4.25]
EI983_12425  ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD [KO:K11752] [EC:3.5.4.26 1.1.1.193]
EI983_07055  DMT family transporter [KO:K09936]
EI983_14885  ABC transporter substrate-binding protein [KO:K02035]
EI983_00850  ABC transporter substrate-binding protein [KO:K02035]
EI983_04585  ABC transporter substrate-binding protein [KO:K02035]
EI983_12810  ABC transporter substrate-binding protein [KO:K02035]
EI983_12875  twin-arginine translocation signal domain-containing protein [KO:K02035]
EI983_09975  ABC transporter substrate-binding protein [KO:K02035]
EI983_14040  ABC transporter substrate-binding protein [KO:K02035]
EI983_04985  ABC transporter substrate-binding protein [KO:K02035]
EI983_04990  ABC transporter substrate-binding protein [KO:K02035]
EI983_15785  ABC transporter substrate-binding protein [KO:K02035]
EI983_09060  ABC transporter substrate-binding protein [KO:K02035]
EI983_04200  ABC transporter substrate-binding protein [KO:K02035]
EI983_05600  ABC transporter substrate-binding protein [KO:K02035]
EI983_05605  ABC transporter substrate-binding protein [KO:K02035]
EI983_06625  peptide ABC transporter substrate-binding protein [KO:K02035]
EI983_16370  ABC transporter substrate-binding protein [KO:K02035]
EI983_00855  ABC transporter permease [KO:K02033]
EI983_04995  ABC transporter permease [KO:K02033]
EI983_15790  ABC transporter permease [KO:K02033]
EI983_04215  ABC transporter permease [KO:K02033]
EI983_06620  ABC transporter permease [KO:K02033]
EI983_16375  ABC transporter permease [KO:K02033]
EI983_00860  ABC transporter permease [KO:K02034]
EI983_05000  ABC transporter permease [KO:K02034]
EI983_15795  ABC transporter permease [KO:K02034]
EI983_04210  ABC transporter permease [KO:K02034]
EI983_06615  ABC transporter permease [KO:K02034]
EI983_16380  ABC transporter permease [KO:K02034]
EI983_00865  ABC transporter ATP-binding protein [KO:K02031 K02032]
EI983_05005  ABC transporter ATP-binding protein [KO:K02031 K02032]
EI983_15800  ABC transporter ATP-binding protein [KO:K02031]
EI983_04205  ABC transporter ATP-binding protein [KO:K02031 K02032]
EI983_16385  ABC transporter ATP-binding protein [KO:K02031]
EI983_06630  ABC transporter ATP-binding protein [KO:K02031 K02032]
EI983_16390  ATP-binding cassette domain-containing protein [KO:K02032]
EI983_02055  yidC; membrane protein insertase YidC [KO:K03217]
EI983_10965  secD; protein translocase subunit SecD [KO:K12257]
EI983_14140  secE; preprotein translocase subunit SecE [KO:K03073]
EI983_06060  secG; preprotein translocase subunit SecG [KO:K03075]
EI983_04935  secY; preprotein translocase subunit SecY [KO:K03076]
EI983_10970  yajC; preprotein translocase subunit YajC [KO:K03210]
EI983_18245  secA; preprotein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
EI983_05150  ftsY; signal recognition particle-docking protein FtsY [KO:K03110]
EI983_18540  secB; protein-export chaperone SecB [KO:K03071]
EI983_15605  signal recognition particle protein [KO:K03106] [EC:3.6.5.4]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00059  Sulfate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00547  L-Noradrenaline
C00788  L-Adrenaline
C01019  L-Fucose
C11837  N-Butyryl-L-homoserine lactone
C11841  N-(3-Oxooctanoyl)homoserine lactone
C11844  N-Heptanoylhomoserine lactone
C11845  N-(3-Hydroxy-7-cis-tetradecenoyl)homoserine lactone
C11848  2-Heptyl-3-hydroxy-quinolone
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C18049  N-Acyl-L-homoserine lactone
C18206  cis-11-Methyl-2-dodecenoic acid
C20643  2-Heptyl-4(1H)-quinolone
C20677  N-(4-Coumaroyl)-L-homoserine lactone
C20959  (4S)-4-Hydroxy-5-phosphooxypentane-2,3-dione
C21195  N-(3-Hydroxybutanoyl)-L-homoserine lactone
C21197  N-Hexanoyl-L-homoserine lactone
C21198  N-(3-Oxohexanoyl)-L-homoserine lactone
C21199  N-Octanoyl-L-homoserine lactone
C21200  N-3-Hydroxyoctanoyl-L-homoserine lactone
C21201  N-3-Oxo-dodecanoyl-L-homoserine lactone
C21202  cis-2-Dodecenoic acid
C21220  AIP-1
C21221  CSP
C21222  CSP
C21223  Blp
C21224  SHP2
C21225  SHP3
C21226  cCF10
C21227  iCF10
C21228  cAD1
C21229  iAD1
C21230  ComX pheromone
C21231  PhrA pentapeptide
C21232  PhrC pentapeptide
C21233  PhrE pentapeptide
C21234  PhrF pentapeptide
C21235  PhrG pentapeptide
C21236  PhrH pentapeptide
C21237  PhrK pentapeptide
C21238  NprX peptide
C21239  PapR peptide
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21244  AgrD peptide
C21245  AgrD1 peptide
C21246  GBAP
C21382  R-THMF
Reference
PMID:22712853
  Authors
Pereira CS, Thompson JA, Xavier KB
  Title
AI-2-mediated signalling in bacteria.
  Journal
FEMS Microbiol Rev 37:156-81 (2013)
DOI:10.1111/j.1574-6976.2012.00345.x
Reference
PMID:23965960
  Authors
Verma SC, Miyashiro T
  Title
Quorum sensing in the squid-Vibrio symbiosis.
  Journal
Int J Mol Sci 14:16386-401 (2013)
DOI:10.3390/ijms140816386
Reference
PMID:24348467
  Authors
Norsworthy AN, Visick KL
  Title
Gimme shelter: how Vibrio fischeri successfully navigates an animal's multiple environments.
  Journal
Front Microbiol 4:356 (2013)
DOI:10.3389/fmicb.2013.00356
Reference
PMID:24065108
  Authors
Papaioannou E, Utari PD, Quax WJ
  Title
Choosing an appropriate infection model to study quorum sensing inhibition in Pseudomonas infections.
  Journal
Int J Mol Sci 14:19309-40 (2013)
DOI:10.3390/ijms140919309
Reference
PMID:20738404
  Authors
Heeb S, Fletcher MP, Chhabra SR, Diggle SP, Williams P, Camara M
  Title
Quinolones: from antibiotics to autoinducers.
  Journal
FEMS Microbiol Rev 35:247-74 (2011)
DOI:10.1111/j.1574-6976.2010.00247.x
Reference
PMID:25866808
  Authors
Rasamiravaka T, Labtani Q, Duez P, El Jaziri M
  Title
The formation of biofilms by Pseudomonas aeruginosa: a review of the natural and synthetic compounds interfering with control mechanisms.
  Journal
Biomed Res Int 2015:759348 (2015)
DOI:10.1155/2015/759348
Reference
PMID:11544214
  Authors
Whiteley M, Greenberg EP
  Title
Promoter specificity elements in Pseudomonas aeruginosa quorum-sensing-controlled genes.
  Journal
J Bacteriol 183:5529-34 (2001)
DOI:10.1128/JB.183.19.5529-5534.2001
Reference
PMID:11497469
  Authors
Chin-A-Woeng TF, van den Broek D, de Voer G, van der Drift KM, Tuinman S, Thomas-Oates JE, Lugtenberg BJ, Bloemberg GV
  Title
Phenazine-1-carboxamide production in the biocontrol strain Pseudomonas chlororaphis PCL1391 is regulated by multiple factors secreted into the growth medium.
  Journal
Mol Plant Microbe Interact 14:969-79 (2001)
DOI:10.1094/MPMI.2001.14.8.969
Reference
PMID:19696934
  Authors
Hughes DT, Clarke MB, Yamamoto K, Rasko DA, Sperandio V
  Title
The QseC adrenergic signaling cascade in Enterohemorrhagic E. coli (EHEC).
  Journal
PLoS Pathog 5:e1000553 (2009)
DOI:10.1371/journal.ppat.1000553
Reference
PMID:22144490
  Authors
Njoroge J, Sperandio V
  Title
Enterohemorrhagic Escherichia coli virulence regulation by two bacterial adrenergic kinases, QseC and QseE.
  Journal
Infect Immun 80:688-703 (2012)
DOI:10.1128/IAI.05921-11
Reference
PMID:23160491
  Authors
Pacheco AR, Curtis MM, Ritchie JM, Munera D, Waldor MK, Moreira CG, Sperandio V
  Title
Fucose sensing regulates bacterial intestinal colonization.
  Journal
Nature 492:113-7 (2012)
DOI:10.1038/nature11623
Reference
PMID:22778415
  Authors
Hirakawa H, Harwood CS, Pechter KB, Schaefer AL, Greenberg EP
  Title
Antisense RNA that affects Rhodopseudomonas palustris quorum-sensing signal receptor expression.
  Journal
Proc Natl Acad Sci U S A 109:12141-6 (2012)
DOI:10.1073/pnas.1200243109
Reference
PMID:14617175
  Authors
Danino VE, Wilkinson A, Edwards A, Downie JA
  Title
Recipient-induced transfer of the symbiotic plasmid pRL1JI in Rhizobium leguminosarum bv. viciae is regulated by a quorum-sensing relay.
  Journal
Mol Microbiol 50:511-25 (2003)
DOI:10.1046/j.1365-2958.2003.03699.x
Reference
PMID:12448738
  Authors
Wisniewski-Dye F, Downie JA
  Title
Quorum-sensing in Rhizobium.
  Journal
Antonie Van Leeuwenhoek 81:397-407 (2002)
DOI:10.1023/A:1020501104051
Reference
PMID:10368158
  Authors
Rodelas B, Lithgow JK, Wisniewski-Dye F, Hardman A, Wilkinson A, Economou A, Williams P, Downie JA
  Title
Analysis of quorum-sensing-dependent control of rhizosphere-expressed (rhi) genes in Rhizobium leguminosarum bv. viciae.
  Journal
J Bacteriol 181:3816-23 (1999)
DOI:10.1128/JB.181.12.3816-3823.1999
Reference
PMID:24550924
  Authors
Lang J, Faure D
  Title
Functions and regulation of quorum-sensing in Agrobacterium tumefaciens.
  Journal
Front Plant Sci 5:14 (2014)
DOI:10.3389/fpls.2014.00014
Reference
PMID:23710277
  Authors
Planamente S, Morera S, Faure D
  Title
In planta fitness-cost of the Atu4232-regulon encoding for a selective GABA-binding sensor in Agrobacterium.
  Journal
Commun Integr Biol 6:e23692 (2013)
DOI:10.4161/cib.23692
Reference
PMID:16943991
  Authors
Barnard AM, Salmond GP
  Title
Quorum sensing in Erwinia species.
  Journal
Anal Bioanal Chem 387:415-23 (2007)
DOI:10.1007/s00216-006-0701-1
Reference
PMID:17360277
  Authors
Barnard AM, Bowden SD, Burr T, Coulthurst SJ, Monson RE, Salmond GP
  Title
Quorum sensing, virulence and secondary metabolite production in plant soft-rotting bacteria.
  Journal
Philos Trans R Soc Lond B Biol Sci 362:1165-83 (2007)
DOI:10.1098/rstb.2007.2042
Reference
PMID:19843225
  Authors
Carlier A, Burbank L, von Bodman SB
  Title
Identification and characterization of three novel EsaI/EsaR quorum-sensing controlled stewartan exopolysaccharide biosynthetic genes in Pantoea stewartii ssp. stewartii.
  Journal
Mol Microbiol 74:903-13 (2009)
DOI:10.1111/j.1365-2958.2009.06906.x
Reference
PMID:7665477
  Authors
Beck von Bodman S, Farrand SK
  Title
Capsular polysaccharide biosynthesis and pathogenicity in Erwinia stewartii require induction by an N-acylhomoserine lactone autoinducer.
  Journal
J Bacteriol 177:5000-8 (1995)
DOI:10.1128/JB.177.17.5000-5008.1995
Reference
PMID:19761612
  Authors
O'Grady EP, Viteri DF, Malott RJ, Sokol PA
  Title
Reciprocal regulation by the CepIR and CciIR quorum sensing systems in Burkholderia cenocepacia.
  Journal
BMC Genomics 10:441 (2009)
DOI:10.1186/1471-2164-10-441
Reference
PMID:16041013
  Authors
Malott RJ, Baldwin A, Mahenthiralingam E, Sokol PA
  Title
Characterization of the cciIR quorum-sensing system in Burkholderia cenocepacia.
  Journal
Infect Immun 73:4982-92 (2005)
DOI:10.1128/IAI.73.8.4982-4992.2005
Reference
PMID:22949660
  Authors
Deng Y, Schmid N, Wang C, Wang J, Pessi G, Wu D, Lee J, Aguilar C, Ahrens CH, Chang C, Song H, Eberl L, Zhang LH
  Title
Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover.
  Journal
Proc Natl Acad Sci U S A 109:15479-84 (2012)
DOI:10.1073/pnas.1205037109
Reference
PMID:23799665
  Authors
Suppiger A, Schmid N, Aguilar C, Pessi G, Eberl L
  Title
Two quorum sensing systems control biofilm formation and virulence in members of the Burkholderia cepacia complex.
  Journal
Virulence 4:400-9 (2013)
DOI:10.4161/viru.25338
Reference
PMID:21166386
  Authors
Deng Y, Wu J, Tao F, Zhang LH
  Title
Listening to a new language: DSF-based quorum sensing in Gram-negative bacteria.
  Journal
Chem Rev 111:160-73 (2011)
DOI:10.1021/cr100354f
Reference
PMID:21227698
  Authors
Ryan RP, Dow JM
  Title
Communication with a growing family: diffusible signal factor (DSF) signaling in bacteria.
  Journal
Trends Microbiol 19:145-52 (2011)
DOI:10.1016/j.tim.2010.12.003
Reference
PMID:15522077
  Authors
Kim J, Kim JG, Kang Y, Jang JY, Jog GJ, Lim JY, Kim S, Suga H, Nagamatsu T, Hwang I
  Title
Quorum sensing and the LysR-type transcriptional activator ToxR regulate toxoflavin biosynthesis and transport in Burkholderia glumae.
  Journal
Mol Microbiol 54:921-34 (2004)
DOI:10.1111/j.1365-2958.2004.04338.x
Reference
PMID:17376080
  Authors
Kim J, Kang Y, Choi O, Jeong Y, Jeong JE, Lim JY, Kim M, Moon JS, Suga H, Hwang I
  Title
Regulation of polar flagellum genes is mediated by quorum sensing and FlhDC in Burkholderia glumae.
  Journal
Mol Microbiol 64:165-79 (2007)
DOI:10.1111/j.1365-2958.2007.05646.x
Reference
PMID:21622734
  Authors
Stauff DL, Bassler BL
  Title
Quorum sensing in Chromobacterium violaceum: DNA recognition and gene regulation by the CviR receptor.
  Journal
J Bacteriol 193:3871-8 (2011)
DOI:10.1128/JB.05125-11
Reference
PMID:21504831
  Authors
Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, Bassler BL, Hughson FM
  Title
A strategy for antagonizing quorum sensing.
  Journal
Mol Cell 42:199-209 (2011)
DOI:10.1016/j.molcel.2011.04.003
Reference
PMID:16513747
  Authors
Hao G, Burr TJ
  Title
Regulation of long-chain N-acyl-homoserine lactones in Agrobacterium vitis.
  Journal
J Bacteriol 188:2173-83 (2006)
DOI:10.1128/JB.188.6.2173-2183.2006
Reference
PMID:20514483
  Authors
Savka MA, Le PT, Burr TJ
  Title
LasR receptor for detection of long-chain quorum-sensing signals: identification of N-acyl-homoserine lactones encoded by the avsI locus of Agrobacterium vitis.
  Journal
Curr Microbiol 62:101-10 (2011)
DOI:10.1007/s00284-010-9679-1
Reference
PMID:26579084
  Authors
Le KY, Otto M
  Title
Quorum-sensing regulation in staphylococci-an overview.
  Journal
Front Microbiol 6:1174 (2015)
DOI:10.3389/fmicb.2015.01174
Reference
PMID:18851841
  Authors
Queck SY, Jameson-Lee M, Villaruz AE, Bach TH, Khan BA, Sturdevant DE, Ricklefs SM, Li M, Otto M
  Title
RNAIII-independent target gene control by the agr quorum-sensing system: insight into the evolution of virulence regulation in Staphylococcus aureus.
  Journal
Mol Cell 32:150-8 (2008)
DOI:10.1016/j.molcel.2008.08.005
Reference
PMID:25714717
  Authors
Darkoh C, DuPont HL, Norris SJ, Kaplan HB
  Title
Toxin synthesis by Clostridium difficile is regulated through quorum signaling.
  Journal
MBio 6:e02569 (2015)
DOI:10.1128/mBio.02569-14
Reference
PMID:25824838
  Authors
Vidal JE, Shak JR, Canizalez-Roman A
  Title
The CpAL quorum sensing system regulates production of hemolysins CPA and PFO to build Clostridium perfringens biofilms.
  Journal
Infect Immun 83:2430-42 (2015)
DOI:10.1128/IAI.00240-15
Reference
PMID:19363118
  Authors
Ohtani K, Yuan Y, Hassan S, Wang R, Wang Y, Shimizu T
  Title
Virulence gene regulation by the agr system in Clostridium perfringens.
  Journal
J Bacteriol 191:3919-27 (2009)
DOI:10.1128/JB.01455-08
Reference
PMID:22736963
  Authors
Li YH, Tian X
  Title
Quorum sensing and bacterial social interactions in biofilms.
  Journal
Sensors (Basel) 12:2519-38 (2012)
DOI:10.3390/s120302519
Reference
PMID:22407687
  Authors
Berg KH, Biornstad TJ, Johnsborg O, Havarstein LS
  Title
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Related
pathway
rom02040  Flagellar assembly
KO pathway
ko02024   
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