KEGG   PATHWAY: rrg02024
Entry
rrg02024                    Pathway                                
Name
Quorum sensing - Rhizobium ruizarguesonis
Description
Quorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal molecules called autoinducers (AIs) that increase in concentration as a function of cell density. The most commonly studied AIs belong to one of the following three categories: acylated homoserine lactones, also referred to as AI-1, used by Gram-negative bacteria; peptide signals, used by Gram-positive bacteria; and AI-2, used by both Gram-negative and Gram-positive bacteria. QS can be divided into at least 4 steps: production of AIs by the bacterial cell; release of AIs, either actively or passively, into the surrounding environment; recognition of AIs by specific receptors; and leading to changes in gene regulation once they exceed a threshold concentration. The processes controlled by QS include virulence, competence, conjugation, antibiotic production, motility, sporulation, and biofilm formation.
Class
Cellular Processes; Cellular community - prokaryotes
Pathway map
rrg02024  Quorum sensing
rrg02024

Other DBs
GO: 0009372
Organism
Rhizobium ruizarguesonis [GN:rrg]
Gene
J3P73_11670  hfq; RNA chaperone Hfq [KO:K03666]
J3P73_13665  3-deoxy-7-phosphoheptulonate synthase [KO:K01626] [EC:2.5.1.54]
J3P73_13700  3-deoxy-7-phosphoheptulonate synthase class II [KO:K01626] [EC:2.5.1.54]
J3P73_16280  PhzF family phenazine biosynthesis protein [KO:K06998] [EC:5.3.3.17]
J3P73_20720  PhzF family phenazine biosynthesis protein [KO:K06998] [EC:5.3.3.17]
J3P73_30020  response regulator transcription factor [KO:K07667]
J3P73_23960  LuxR family transcriptional regulator [KO:K07782]
J3P73_33035  LuxR family transcriptional regulator [KO:K07782]
J3P73_35610  GNAT family N-acetyltransferase [KO:K18096] [EC:2.3.1.228 2.3.1.229 2.3.1.-]
J3P73_35630  LuxR family transcriptional regulator [KO:K18098]
J3P73_17270  N-acyl-L-homoserine lactone (AHL) synthase [KO:K20248] [EC:2.3.1.184]
J3P73_17265  LuxR family transcriptional regulator [KO:K20252]
J3P73_34950  GNAT family N-acetyltransferase [KO:K22955] [EC:2.3.1.184]
J3P73_35010  autoinducer binding domain-containing protein [KO:K19732]
J3P73_34955  trbB; P-type conjugative transfer ATPase TrbB [KO:K20527] [EC:7.4.2.8]
J3P73_34960  TrbC/VirB2 family protein [KO:K20528]
J3P73_34965  conjugal transfer protein TrbD [KO:K20529]
J3P73_34970  VirB4 family type IV secretion/conjugal transfer ATPase [KO:K20530] [EC:7.4.2.8]
J3P73_34975  trbJ; P-type conjugative transfer protein TrbJ [KO:K20266]
J3P73_34980  trbK; entry exclusion protein TrbK [KO:K20555]
J3P73_34985  trbL; P-type conjugative transfer protein TrbL [KO:K07344]
J3P73_34990  conjugal transfer protein TrbF [KO:K20531]
J3P73_34995  trbG; P-type conjugative transfer protein TrbG [KO:K20532]
J3P73_35000  lipoprotein [KO:K20267]
J3P73_35005  trbI; IncP-type conjugal transfer protein TrbI [KO:K20533]
J3P73_25170  acyl-homoserine-lactone synthase [KO:K20249] [EC:2.3.1.184]
J3P73_25165  LuxR family transcriptional regulator [KO:K25873]
J3P73_34675  protein rhiA [KO:K20268]
J3P73_35615  protein rhiA [KO:K20268]
J3P73_35620  tail fiber protein [KO:K20269]
J3P73_35625  protein rhiC [KO:K20270]
J3P73_35015  transcriptional repressor TraM [KO:K20272]
J3P73_05595  extracellular solute-binding protein [KO:K02055]
J3P73_10680  ABC transporter substrate-binding protein [KO:K02055]
J3P73_17120  ABC transporter substrate-binding protein [KO:K02055]
J3P73_17220  extracellular solute-binding protein [KO:K02055]
J3P73_20175  ABC transporter substrate-binding protein [KO:K02055]
J3P73_21660  ABC transporter substrate-binding protein [KO:K02055]
J3P73_31835  polyamine ABC transporter substrate-binding protein [KO:K02055]
J3P73_31875  ABC transporter substrate-binding protein [KO:K02055]
J3P73_32900  extracellular solute-binding protein [KO:K02055]
J3P73_35850  ABC transporter substrate-binding protein [KO:K02055]
J3P73_35990  ABC transporter substrate-binding protein [KO:K02055]
J3P73_05585  ABC transporter permease [KO:K02053]
J3P73_10670  ABC transporter permease [KO:K02053]
J3P73_17130  ABC transporter permease [KO:K02053]
J3P73_17210  ABC transporter permease [KO:K02053]
J3P73_20185  ABC transporter permease [KO:K02053]
J3P73_21675  ABC transporter permease [KO:K02053]
J3P73_23030  ABC transporter permease [KO:K02053]
J3P73_31845  ABC transporter permease [KO:K02053]
J3P73_31865  ABC transporter permease [KO:K02053]
J3P73_32890  ABC transporter permease subunit [KO:K02053]
J3P73_35890  ABC transporter permease subunit [KO:K02053 K02054]
J3P73_35980  ABC transporter permease subunit [KO:K02053 K02054]
J3P73_05590  ABC transporter permease [KO:K02054]
J3P73_10675  ABC transporter permease [KO:K02054]
J3P73_17125  ABC transporter permease subunit [KO:K02054]
J3P73_17215  ABC transporter permease [KO:K02054]
J3P73_20180  ABC transporter permease [KO:K02054]
J3P73_21670  ABC transporter permease [KO:K02054]
J3P73_31840  ABC transporter permease [KO:K02054]
J3P73_31870  ABC transporter permease [KO:K02054]
J3P73_32895  ABC transporter permease subunit [KO:K02054]
J3P73_05600  ABC transporter ATP-binding protein [KO:K02052]
J3P73_10665  ABC transporter ATP-binding protein [KO:K02052]
J3P73_17135  ABC transporter ATP-binding protein [KO:K02052]
J3P73_17225  ABC transporter ATP-binding protein [KO:K02052]
J3P73_20170  ABC transporter ATP-binding protein [KO:K02052]
J3P73_21665  ABC transporter ATP-binding protein [KO:K02052]
J3P73_23025  ABC transporter ATP-binding protein [KO:K02052]
J3P73_31850  ABC transporter ATP-binding protein [KO:K02052]
J3P73_31880  ABC transporter ATP-binding protein [KO:K02052]
J3P73_32885  ABC transporter ATP-binding protein [KO:K02052]
J3P73_35895  ABC transporter ATP-binding protein [KO:K02052]
J3P73_35985  ABC transporter ATP-binding protein [KO:K02052]
J3P73_30535  transporter substrate-binding domain-containing protein [KO:K01999]
J3P73_13225  ABC transporter substrate-binding protein [KO:K01999]
J3P73_18250  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
J3P73_19320  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
J3P73_20030  ABC transporter substrate-binding protein [KO:K01999]
J3P73_20400  ABC transporter substrate-binding protein [KO:K01999]
J3P73_26485  ABC transporter substrate-binding protein [KO:K01999]
J3P73_27950  ABC transporter substrate-binding protein [KO:K01999]
J3P73_30145  ABC transporter substrate-binding protein [KO:K01999]
J3P73_35670  ABC transporter substrate-binding protein [KO:K01999]
J3P73_08875  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_19345  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_20025  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_20405  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_26470  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_27965  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_30160  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_35660  branched-chain amino acid ABC transporter permease [KO:K01997]
J3P73_19340  livM; high-affinity branched-chain amino acid ABC transporter permease LivM [KO:K01998]
J3P73_20020  branched-chain amino acid ABC transporter permease [KO:K01998]
J3P73_20410  branched-chain amino acid ABC transporter permease [KO:K01998]
J3P73_27970  branched-chain amino acid ABC transporter permease [KO:K01998]
J3P73_30165  branched-chain amino acid ABC transporter permease [KO:K01998]
J3P73_35665  branched-chain amino acid ABC transporter permease [KO:K01998]
J3P73_19335  ABC transporter ATP-binding protein [KO:K01995]
J3P73_20015  ABC transporter ATP-binding protein [KO:K01995]
J3P73_20415  ABC transporter ATP-binding protein [KO:K01995]
J3P73_26480  ABC transporter ATP-binding protein [KO:K01995]
J3P73_27955  ABC transporter ATP-binding protein [KO:K01995]
J3P73_30150  ABC transporter ATP-binding protein [KO:K01995]
J3P73_35655  ABC transporter ATP-binding protein [KO:K01995]
J3P73_19330  ABC transporter ATP-binding protein [KO:K01996]
J3P73_20010  ABC transporter ATP-binding protein [KO:K01996]
J3P73_20420  ABC transporter ATP-binding protein [KO:K01996]
J3P73_26475  ABC transporter ATP-binding protein [KO:K01996]
J3P73_27960  ABC transporter ATP-binding protein [KO:K01996]
J3P73_30155  ABC transporter ATP-binding protein [KO:K01996]
J3P73_35675  ABC transporter ATP-binding protein [KO:K01996]
J3P73_02880  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
J3P73_19700  Crp/Fnr family transcriptional regulator [KO:K10914]
J3P73_19745  Crp/Fnr family transcriptional regulator [KO:K10914]
J3P73_16200  transcriptional repressor [KO:K09823]
J3P73_09070  ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD [KO:K11752] [EC:3.5.4.26 1.1.1.193]
J3P73_30490  DMT family transporter [KO:K09936]
J3P73_30495  DMT family transporter [KO:K09936]
J3P73_18265  peptide ABC transporter substrate-binding protein [KO:K15580]
J3P73_18270  ABC transporter permease subunit [KO:K15581]
J3P73_18275  ABC transporter permease subunit [KO:K15582]
J3P73_18280  ABC transporter ATP-binding protein [KO:K15583]
J3P73_18285  ATP-binding cassette domain-containing protein [KO:K10823]
J3P73_01405  ABC transporter substrate-binding protein [KO:K02035]
J3P73_11980  ABC transporter substrate-binding protein [KO:K02035]
J3P73_12175  ABC transporter substrate-binding protein [KO:K02035]
J3P73_23085  ABC transporter substrate-binding protein [KO:K02035]
J3P73_23630  ABC transporter substrate-binding protein [KO:K02035]
J3P73_24025  ABC transporter substrate-binding protein [KO:K02035]
J3P73_25655  ABC transporter substrate-binding protein [KO:K02035]
J3P73_25695  ABC transporter substrate-binding protein [KO:K02035]
J3P73_25750  ABC transporter substrate-binding protein [KO:K02035]
J3P73_26325  peptide ABC transporter substrate-binding protein [KO:K02035]
J3P73_27050  ABC transporter substrate-binding protein [KO:K02035]
J3P73_27820  ABC transporter substrate-binding protein [KO:K02035]
J3P73_27845  ABC transporter substrate-binding protein [KO:K02035]
J3P73_28265  ABC transporter substrate-binding protein [KO:K02035]
J3P73_29650  ABC transporter substrate-binding protein [KO:K02035]
J3P73_30340  ABC transporter substrate-binding protein [KO:K02035]
J3P73_30410  ABC transporter substrate-binding protein [KO:K02035]
J3P73_30545  ABC transporter substrate-binding protein [KO:K02035]
J3P73_30740  ABC transporter substrate-binding protein [KO:K02035]
J3P73_32000  ABC transporter substrate-binding protein [KO:K02035]
J3P73_32745  ABC transporter substrate-binding protein [KO:K02035]
J3P73_33010  ABC transporter substrate-binding protein [KO:K02035]
J3P73_33145  ABC transporter substrate-binding protein [KO:K02035]
J3P73_33670  ABC transporter substrate-binding protein [KO:K02035]
J3P73_35950  ABC transporter substrate-binding protein [KO:K02035]
J3P73_30380  ABC transporter substrate-binding protein [KO:K02035]
J3P73_33140  ABC transporter permease [KO:K02033]
J3P73_01400  ABC transporter permease [KO:K02033]
J3P73_11985  ABC transporter permease [KO:K02033]
J3P73_19585  ABC transporter permease [KO:K02033]
J3P73_22855  ABC transporter permease [KO:K02033]
J3P73_23095  ABC transporter permease [KO:K02033]
J3P73_23635  ABC transporter permease [KO:K02033]
J3P73_24020  ABC transporter permease [KO:K02033]
J3P73_25640  ABC transporter permease [KO:K02033]
J3P73_25690  ABC transporter permease [KO:K02033]
J3P73_25745  ABC transporter permease [KO:K02033]
J3P73_26275  ABC transporter permease [KO:K02033]
J3P73_27045  ABC transporter permease [KO:K02033]
J3P73_27815  ABC transporter permease [KO:K02033]
J3P73_27850  ABC transporter permease [KO:K02033]
J3P73_28260  ABC transporter permease [KO:K02033]
J3P73_29645  ABC transporter permease [KO:K02033]
J3P73_30335  ABC transporter permease [KO:K02033]
J3P73_30385  ABC transporter permease [KO:K02033]
J3P73_30415  ABC transporter permease [KO:K02033]
J3P73_30565  ABC transporter permease [KO:K02033]
J3P73_30735  ABC transporter permease [KO:K02033]
J3P73_32005  ABC transporter permease [KO:K02033]
J3P73_32740  ABC transporter permease [KO:K02033]
J3P73_33025  ABC transporter permease [KO:K02033]
J3P73_33675  ABC transporter permease [KO:K02033]
J3P73_35945  ABC transporter permease [KO:K02033]
J3P73_01395  ABC transporter permease [KO:K02034]
J3P73_11990  ABC transporter permease [KO:K02034]
J3P73_19590  ABC transporter permease [KO:K02034]
J3P73_22850  ABC transporter permease [KO:K02034]
J3P73_23100  ABC transporter permease [KO:K02034]
J3P73_23640  ABC transporter permease [KO:K02034]
J3P73_24015  ABC transporter permease [KO:K02034]
J3P73_25635  ABC transporter permease [KO:K02034]
J3P73_25685  ABC transporter permease [KO:K02034]
J3P73_25740  ABC transporter permease [KO:K02034]
J3P73_26280  ABC transporter permease [KO:K02034]
J3P73_27040  ABC transporter permease [KO:K02034]
J3P73_27810  ABC transporter permease [KO:K02034]
J3P73_27855  ABC transporter permease [KO:K02034]
J3P73_28255  ABC transporter permease [KO:K02034]
J3P73_29640  ABC transporter permease [KO:K02034]
J3P73_30330  ABC transporter permease [KO:K02034]
J3P73_30390  ABC transporter permease [KO:K02034]
J3P73_30420  ABC transporter permease [KO:K02034]
J3P73_30560  ABC transporter permease [KO:K02034]
J3P73_30730  ABC transporter permease [KO:K02034]
J3P73_32010  ABC transporter permease [KO:K02034]
J3P73_32735  ABC transporter permease [KO:K02034]
J3P73_33020  ABC transporter permease [KO:K02034]
J3P73_33135  ABC transporter permease [KO:K02034]
J3P73_33680  ABC transporter permease [KO:K02034]
J3P73_35940  ABC transporter permease [KO:K02034]
J3P73_11995  ABC transporter ATP-binding protein [KO:K02031]
J3P73_19595  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_22845  ABC transporter ATP-binding protein [KO:K02031]
J3P73_23105  ABC transporter ATP-binding protein [KO:K02031]
J3P73_23655  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_24010  ABC transporter ATP-binding protein [KO:K02031]
J3P73_25630  ABC transporter ATP-binding protein [KO:K02031]
J3P73_25675  ABC transporter ATP-binding protein [KO:K02031]
J3P73_25735  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_26285  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_27035  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_27805  ABC transporter ATP-binding protein [KO:K02031]
J3P73_27860  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_28270  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_29635  ABC transporter ATP-binding protein [KO:K02031]
J3P73_30325  ABC transporter ATP-binding protein [KO:K02031]
J3P73_30370  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_30435  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_30555  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_30725  ABC transporter ATP-binding protein [KO:K02031]
J3P73_32015  ABC transporter ATP-binding protein [KO:K02031]
J3P73_32730  ABC transporter ATP-binding protein [KO:K02031]
J3P73_33015  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_33130  ABC transporter ATP-binding protein [KO:K02031]
J3P73_33685  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_35935  ABC transporter ATP-binding protein [KO:K02031 K02032]
J3P73_12000  ABC transporter ATP-binding protein [KO:K02032]
J3P73_23110  ABC transporter ATP-binding protein [KO:K02032]
J3P73_24005  ABC transporter ATP-binding protein [KO:K02032]
J3P73_25625  ABC transporter ATP-binding protein [KO:K02032]
J3P73_25670  ATP-binding cassette domain-containing protein [KO:K02032]
J3P73_27800  ABC transporter ATP-binding protein [KO:K02032]
J3P73_29630  ABC transporter ATP-binding protein [KO:K02032]
J3P73_30320  ABC transporter ATP-binding protein [KO:K02032]
J3P73_32725  ABC transporter ATP-binding protein [KO:K02032]
J3P73_33125  ATP-binding cassette domain-containing protein [KO:K02032]
J3P73_32020  ATP-binding cassette domain-containing protein [KO:K02032]
J3P73_02570  yidC; membrane protein insertase YidC [KO:K03217]
J3P73_03990  secD; protein translocase subunit SecD [KO:K12257]
J3P73_10940  secDF; protein translocase subunit SecDF [KO:K12257]
J3P73_09875  secE; preprotein translocase subunit SecE [KO:K03073]
J3P73_12755  secG; preprotein translocase subunit SecG [KO:K03075]
J3P73_10045  secY; preprotein translocase subunit SecY [KO:K03076]
J3P73_10935  yajC; preprotein translocase subunit YajC [KO:K03210]
J3P73_22255  secA; preprotein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
J3P73_23470  ftsY; signal recognition particle-docking protein FtsY [KO:K03110]
J3P73_00035  secB; protein-export chaperone SecB [KO:K03071]
J3P73_23490  ffh; signal recognition particle protein [KO:K03106] [EC:3.6.5.4]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00059  Sulfate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00547  L-Noradrenaline
C00788  L-Adrenaline
C01019  L-Fucose
C11837  N-Butyryl-L-homoserine lactone
C11841  N-(3-Oxooctanoyl)homoserine lactone
C11844  N-Heptanoylhomoserine lactone
C11845  N-(3-Hydroxy-7-cis-tetradecenoyl)homoserine lactone
C11848  2-Heptyl-3-hydroxy-quinolone
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C18049  N-Acyl-L-homoserine lactone
C18206  cis-11-Methyl-2-dodecenoic acid
C20643  2-Heptyl-4(1H)-quinolone
C20677  N-(4-Coumaroyl)-L-homoserine lactone
C20959  (4S)-4-Hydroxy-5-phosphooxypentane-2,3-dione
C21195  N-(3-Hydroxybutanoyl)-L-homoserine lactone
C21197  N-Hexanoyl-L-homoserine lactone
C21198  N-(3-Oxohexanoyl)-L-homoserine lactone
C21199  N-Octanoyl-L-homoserine lactone
C21200  N-3-Hydroxyoctanoyl-L-homoserine lactone
C21201  N-3-Oxo-dodecanoyl-L-homoserine lactone
C21202  cis-2-Dodecenoic acid
C21220  AIP-1
C21221  CSP
C21222  CSP
C21223  Blp
C21224  SHP2
C21225  SHP3
C21226  cCF10
C21227  iCF10
C21228  cAD1
C21229  iAD1
C21230  ComX pheromone
C21231  PhrA pentapeptide
C21232  PhrC pentapeptide
C21233  PhrE pentapeptide
C21234  PhrF pentapeptide
C21235  PhrG pentapeptide
C21236  PhrH pentapeptide
C21237  PhrK pentapeptide
C21238  NprX peptide
C21239  PapR peptide
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21244  AgrD peptide
C21245  AgrD1 peptide
C21246  GBAP
C21382  R-THMF
Reference
PMID:22712853
  Authors
Pereira CS, Thompson JA, Xavier KB
  Title
AI-2-mediated signalling in bacteria.
  Journal
FEMS Microbiol Rev 37:156-81 (2013)
DOI:10.1111/j.1574-6976.2012.00345.x
Reference
PMID:23965960
  Authors
Verma SC, Miyashiro T
  Title
Quorum sensing in the squid-Vibrio symbiosis.
  Journal
Int J Mol Sci 14:16386-401 (2013)
DOI:10.3390/ijms140816386
Reference
PMID:24348467
  Authors
Norsworthy AN, Visick KL
  Title
Gimme shelter: how Vibrio fischeri successfully navigates an animal's multiple environments.
  Journal
Front Microbiol 4:356 (2013)
DOI:10.3389/fmicb.2013.00356
Reference
PMID:24065108
  Authors
Papaioannou E, Utari PD, Quax WJ
  Title
Choosing an appropriate infection model to study quorum sensing inhibition in Pseudomonas infections.
  Journal
Int J Mol Sci 14:19309-40 (2013)
DOI:10.3390/ijms140919309
Reference
PMID:20738404
  Authors
Heeb S, Fletcher MP, Chhabra SR, Diggle SP, Williams P, Camara M
  Title
Quinolones: from antibiotics to autoinducers.
  Journal
FEMS Microbiol Rev 35:247-74 (2011)
DOI:10.1111/j.1574-6976.2010.00247.x
Reference
PMID:25866808
  Authors
Rasamiravaka T, Labtani Q, Duez P, El Jaziri M
  Title
The formation of biofilms by Pseudomonas aeruginosa: a review of the natural and synthetic compounds interfering with control mechanisms.
  Journal
Biomed Res Int 2015:759348 (2015)
DOI:10.1155/2015/759348
Reference
PMID:11544214
  Authors
Whiteley M, Greenberg EP
  Title
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Related
pathway
rrg02040  Flagellar assembly
KO pathway
ko02024   
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