KEGG   PATHWAY: rsl00630
Entry
rsl00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Ralstonia solanacearum PSI07
Class
Metabolism; Carbohydrate metabolism
Pathway map
rsl00630  Glyoxylate and dicarboxylate metabolism
rsl00630

Module
rsl_M00012  Glyoxylate cycle [PATH:rsl00630]
rsl_M00621  Glycine cleavage system [PATH:rsl00630]
Other DBs
GO: 0046487 0043648
Organism
Ralstonia solanacearum PSI07 [GN:rsl]
Gene
RPSI07_2008  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
RPSI07_1478  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
RPSI07_mp1301  putative o-succinylbenzoate-CoA ligase protein (acs) [KO:K01895] [EC:6.2.1.1]
RPSI07_mp0528  putative acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
RPSI07_2003  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
RPSI07_1431  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
RPSI07_1438  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
RPSI07_mp0134  acnA; aconitate hydratase 1 protein [KO:K01681] [EC:4.2.1.3]
RPSI07_1425  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
RPSI07_1804  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RPSI07_1725  phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) [KO:K00626] [EC:2.3.1.9]
RPSI07_1730  phaA; acetyl-CoA acetyltransferase, thiolase-like [KO:K00626] [EC:2.3.1.9]
RPSI07_2825  fadI; 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex subunit beta) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) (Acyl-CoA ligase) (ACSs) [KO:K00626] [EC:2.3.1.9]
RPSI07_3138  putative acetyl-CoA acetyltransferase with thiolase domain [KO:K00626] [EC:2.3.1.9]
RPSI07_0940  phaB; Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
RPSI07_1726  phaB; Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
RPSI07_0849  glcD; Glycolate oxidase subunit glcD [KO:K00104] [EC:1.1.99.14]
RPSI07_0848  glcE; Glycolate oxidase subunit glcE [KO:K11472] [EC:1.1.99.14]
RPSI07_0847  glcF; Glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
RPSI07_mp1685  katB; Catalase precursor (Paraquat-inducible catalase isozyme B) [KO:K03781] [EC:1.11.1.6]
RPSI07_0823  katA; Catalase [KO:K03781] [EC:1.11.1.6]
RPSI07_3152  2-ketoacid reductase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RPSI07_mp1041  putative D-3-phosphoglycerate dehydrogenase, NAD(P)-binding domain [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RPSI07_mp0633  Glyoxylate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
RPSI07_2360  gyaR; Glyoxylate reductase (Glycolate reductase) [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
RPSI07_mp1604  putative phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
RPSI07_0624  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
RPSI07_2352  gph; phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
RPSI07_mp0419  putative phosphoglycolate phosphatase (PGP) [KO:K01091] [EC:3.1.3.18]
RPSI07_mp0835  glnA; Glutamine synthetase 1 (Glutamine synthetase I) (Glutamate--ammonia ligase I) (GSI) [KO:K01915] [EC:6.3.1.2]
RPSI07_2609  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
RPSI07_0150  gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent [KO:K00281] [EC:1.4.4.2]
RPSI07_0152  gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [KO:K00605] [EC:2.1.2.10]
RPSI07_1693  pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes [KO:K00382] [EC:1.8.1.4]
RPSI07_2094  lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein [KO:K00382] [EC:1.8.1.4]
RPSI07_0151  gcvH; glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor [KO:K02437]
RPSI07_0165  gcl; Tartronate-semialdehyde synthase (glyoxylate carboligase) [KO:K01608] [EC:4.1.1.47]
RPSI07_0164  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
RPSI07_0163  glxR; tartronic semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
RPSI07_1045  3-hydroxyisobutyrate dehydrogenase [KO:K00042] [EC:1.1.1.60]
RPSI07_mp1426  ttuD; HYDROXYPYRUVATE REDUCTASE OXIDOREDUCTASE PROTEIN; tartrate degradation [KO:K11529] [EC:2.7.1.165]
RPSI07_2881  ttuD; hydroxypyruvate reductase oxidoreductase protein [KO:K11529] [EC:2.7.1.165]
RPSI07_mp1717  putative tartrate decarboxylase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RPSI07_mp0990  putative tartrate dehydrogenase/decarboxylase ttuC [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RPSI07_mp1032  putative tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating])(ttuC) [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RPSI07_mp1220  putative bifunctional protein: 2-keto-3-deoxygluconate 6-phosphate aldolase; 2-keto-4-hydroxyglutarate aldolase; oxaloacetate decarboxylase (eda) [KO:K01625] [EC:4.1.2.14 4.1.3.42]
RPSI07_1095  fdhA; formate dehydrogenase, alpha subunit (Fe4S4 domain) [KO:K00123] [EC:1.17.1.9]
RPSI07_1096  fdhB; Formate dehydrogenase iron-sulfur subunit [KO:K00124]
RPSI07_1098  putative formate dehydrogenase, cytochrome b556(fdo) subunit (fdoI) [KO:K00127]
RPSI07_2580  putative metal-dependent hydrolase cyclase (arylformamidase) [KO:K07130] [EC:3.5.1.9]
RPSI07_1520  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rsl00010  Glycolysis / Gluconeogenesis
rsl00020  Citrate cycle (TCA cycle)
rsl00030  Pentose phosphate pathway
rsl00053  Ascorbate and aldarate metabolism
rsl00071  Fatty acid degradation
rsl00230  Purine metabolism
rsl00250  Alanine, aspartate and glutamate metabolism
rsl00260  Glycine, serine and threonine metabolism
rsl00620  Pyruvate metabolism
rsl00710  Carbon fixation by Calvin cycle
rsl00750  Vitamin B6 metabolism
rsl00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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