KEGG   PATHWAY: rsn00630
Entry
rsn00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Ralstonia solanacearum Po82
Class
Metabolism; Carbohydrate metabolism
Pathway map
rsn00630  Glyoxylate and dicarboxylate metabolism
rsn00630

Module
rsn_M00012  Glyoxylate cycle [PATH:rsn00630]
rsn_M00621  Glycine cleavage system [PATH:rsn00630]
Other DBs
GO: 0046487 0043648
Organism
Ralstonia solanacearum Po82 [GN:rsn]
Gene
RSPO_c01997  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
RSPO_c01487  acsA; acetyl-coenzyme a synthetase (acetate--coa ligase) (acyl-activating enzyme) protein [KO:K01895] [EC:6.2.1.1]
RSPO_m00993  acsA; acetyl-coenzyme a synthetase [KO:K01895] [EC:6.2.1.1]
RSPO_m00730  acetyl-coenzyme a synthetase (acetate--coa ligase) (acyl-activating enzyme) protein [KO:K01895] [EC:6.2.1.1]
RSPO_c01993  aceB; malate synthase a (msa or masy protein) [KO:K01638] [EC:2.3.3.9]
RSPO_c01440  mdh; malate dehydrogenase protein [KO:K00024] [EC:1.1.1.37]
RSPO_c01447  gltA; citrate synthase protein [KO:K01647] [EC:2.3.3.1]
RSPO_m00179  acnA3; aconitate hydratase 1 protein [KO:K01681] [EC:4.2.1.3]
RSPO_c01433  acnA1; aconitate hydratase protein [KO:K01681] [EC:4.2.1.3]
RSPO_c01797  fadA; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
RSPO_c01719  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RSPO_c03130  atoB; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RSPO_c01713  phaA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RSPO_c00926  phaB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
RSPO_c01714  phbB; acetoacetyl-coa reductase protein [KO:K00023] [EC:1.1.1.36]
RSPO_c00834  glcD; glycolate oxidase (fad-linked subunit) protein [KO:K00104] [EC:1.1.99.14]
RSPO_c00832  glcE; glycolate oxidase subunit protein [KO:K11472] [EC:1.1.99.14]
RSPO_c00831  glcF; glycolate oxidase (iron-sulfur subunit) protein [KO:K11473] [EC:1.1.99.14]
RSPO_m01570  katE; catalase hydroperoxidase HpiI oxidoreductase [KO:K03781] [EC:1.11.1.6]
RSPO_c03146  Putative 2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RSPO_m01323  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RSPO_c02334  gyaR; glyoxylate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
RSPO_m00320  gph; 2-phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
RSPO_c00628  gph; phosphoglycolate phosphatas protein [KO:K01091] [EC:3.1.3.18]
RSPO_c02325  phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
RSPO_c02635  glyA1; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
RSPO_c00160  gcvP; glycine cleavage complex protein p, glycine decarboxylase, plp-dependent [KO:K00281] [EC:1.4.4.2]
RSPO_c00162  gcvT; glycine cleavage complex protein t, aminomethyltransferase, tetrahydrofolate-dependent [KO:K00605] [EC:2.1.2.10]
RSPO_c02090  lpdA; Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
RSPO_c01679  pdhL; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
RSPO_c00161  gcvH; glycine cleavage system H protein [KO:K02437]
RSPO_c00179  gcl; tartronate-semialdehyde synthase (glyoxylate carboligase) [KO:K01608] [EC:4.1.1.47]
RSPO_c00178  hyi; hydroxypyruvate isomerase protein [KO:K01816] [EC:5.3.1.22]
RSPO_c00177  glxR; transmembrane 2-hydroxy-3-oxopropionate reductase protein [KO:K00042] [EC:1.1.1.60]
RSPO_c01021  tartronic semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
RSPO_c00176  ttuD; hydroxypyruvate reductase oxidoreductase protein [KO:K11529] [EC:2.7.1.165]
RSPO_m00570  ttuD1; hydroxypyruvate reductase oxidoreductase protein [KO:K11529] [EC:2.7.1.165]
RSPO_c02907  hydroxypyruvate reductase oxidoreductase protein [KO:K11529] [EC:2.7.1.165]
RSPO_m01602  tartrate dehydrogenase protein [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RSPO_m00572  ttuC2; tartrate dehydrogenase oxidoreductase protein [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RSPO_m01314  ttuC; tartrate dehydrogenase protein [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RSPO_m00830  eda; bifunctional alkh protein (khg/kdpg aldolase): 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
RSPO_c01074  fdhA; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
RSPO_c01075  fdhB; formate dehydrogenase iron-sulfur subunit [KO:K00124]
RSPO_c01077  conserved hypothetical protein [KO:K00127]
RSPO_c02605  kynB; kynurenine formidase protein [KO:K07130] [EC:3.5.1.9]
RSPO_c01517  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rsn00010  Glycolysis / Gluconeogenesis
rsn00020  Citrate cycle (TCA cycle)
rsn00030  Pentose phosphate pathway
rsn00053  Ascorbate and aldarate metabolism
rsn00071  Fatty acid degradation
rsn00230  Purine metabolism
rsn00250  Alanine, aspartate and glutamate metabolism
rsn00260  Glycine, serine and threonine metabolism
rsn00620  Pyruvate metabolism
rsn00710  Carbon fixation by Calvin cycle
rsn00750  Vitamin B6 metabolism
rsn00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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