KEGG   PATHWAY: rze00630
Entry
rze00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhagoletis zephyria (snowberry fruit fly)
Class
Metabolism; Carbohydrate metabolism
Pathway map
rze00630  Glyoxylate and dicarboxylate metabolism
rze00630

Module
rze_M00621  Glycine cleavage system [PATH:rze00630]
Other DBs
GO: 0046487 0043648
Organism
Rhagoletis zephyria (snowberry fruit fly) [GN:rze]
Gene
108369192  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
108382554  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
108365590  LOW QUALITY PROTEIN: acetyl-coenzyme A synthetase-like [KO:K01895] [EC:6.2.1.1]
108382054  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
108374068  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
108378326  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
108371031  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
108371296  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
108371473  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
108366201  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
108359922  probable citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
108364246  citrate synthase-like [KO:K01647] [EC:2.3.3.1]
108367319  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
108367673  LOW QUALITY PROTEIN: aconitate hydratase A-like [KO:K01681] [EC:4.2.1.3]
108369364  cytoplasmic aconitate hydratase-like [KO:K01681] [EC:4.2.1.3]
108365122  cytoplasmic aconitate hydratase-like [KO:K01681] [EC:4.2.1.3]
108358546  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
108368608  acetyl-CoA acetyltransferase-like [KO:K00626] [EC:2.3.1.9]
108369912  acetyl-CoA acetyltransferase B, mitochondrial-like [KO:K00626] [EC:2.3.1.9]
108379894  acetyl-CoA acetyltransferase A, mitochondrial-like [KO:K00626] [EC:2.3.1.9]
108360328  acetyl-CoA acetyltransferase, cytosolic [KO:K00626] [EC:2.3.1.9]
108358507  acetyl-CoA acetyltransferase, mitochondrial [KO:K00626] [EC:2.3.1.9]
108382649  propionyl-CoA carboxylase alpha chain, mitochondrial-like [KO:K01965] [EC:6.4.1.3]
108376521  propionyl-CoA carboxylase beta chain-like [KO:K01966] [EC:6.4.1.3 2.1.3.15]
108363487  propionyl-CoA carboxylase beta chain, mitochondrial-like [KO:K01966] [EC:6.4.1.3 2.1.3.15]
108376331  methylmalonyl-CoA mutase, mitochondrial-like [KO:K01847] [EC:5.4.99.2]
108380065  peroxisomal (S)-2-hydroxy-acid oxidase GLO3-like [KO:K11517] [EC:1.1.3.15]
108360533  peroxisomal (S)-2-hydroxy-acid oxidase GLO5 isoform X1 [KO:K11517] [EC:1.1.3.15]
108380166  catalase-like [KO:K03781] [EC:1.11.1.6]
108371759  catalase-like [KO:K03781] [EC:1.11.1.6]
108357496  catalase-like [KO:K03781] [EC:1.11.1.6]
108379259  glyoxylate reductase/hydroxypyruvate reductase-like [KO:K00049] [EC:1.1.1.79 1.1.1.81]
108358911  glyoxylate reductase/hydroxypyruvate reductase [KO:K00049] [EC:1.1.1.79 1.1.1.81]
108377873  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
108377874  glycerol-3-phosphate phosphatase-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
108377875  glycerol-3-phosphate phosphatase-like isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
108370855  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
108369290  serine--pyruvate aminotransferase, mitochondrial [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
108379469  glutamine synthetase 2 cytoplasmic [KO:K01915] [EC:6.3.1.2]
108382078  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
108373858  glutamine synthetase 2 cytoplasmic [KO:K01915] [EC:6.3.1.2]
108356309  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
108356888  glutamine synthetase 2 cytoplasmic-like [KO:K01915] [EC:6.3.1.2]
108359253  glutamine synthetase 1, mitochondrial [KO:K01915] [EC:6.3.1.2]
108377685  serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
108366202  serine hydroxymethyltransferase, cytosolic-like isoform X1 [KO:K00600] [EC:2.1.2.1]
108354826  serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
108378572  glycine dehydrogenase (decarboxylating), mitochondrial isoform X1 [KO:K00281] [EC:1.4.4.2]
108377898  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
108380947  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
108375054  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
108382929  glycine cleavage system H protein, mitochondrial [KO:K02437]
108364768  putative hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
108377794  glycerate kinase-like [KO:K11529] [EC:2.7.1.165]
108381152  glycerate kinase-like [KO:K11529] [EC:2.7.1.165]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rze00010  Glycolysis / Gluconeogenesis
rze00020  Citrate cycle (TCA cycle)
rze00030  Pentose phosphate pathway
rze00053  Ascorbate and aldarate metabolism
rze00071  Fatty acid degradation
rze00230  Purine metabolism
rze00250  Alanine, aspartate and glutamate metabolism
rze00260  Glycine, serine and threonine metabolism
rze00620  Pyruvate metabolism
rze00750  Vitamin B6 metabolism
rze00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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