KEGG   PATHWAY: shx04137
Entry
shx04137                    Pathway                                
Name
Mitophagy - animal - Schistosoma haematobium (urinary blood fluke)
Description
Mitochondria act as the energy powerhouse of the cell, and are essential for eukaryotic cells to grow and function normally. However, deleterious byproducts of oxidative phosphorylation process called reactive oxidative species (ROS) lead to mitochondrial dysfunction. If the damage is too excessive to be repaired, such mitochondria are selectively recognized and targeted for degradation by a specific mode of autophagy, termed mitophagy. The loss of the mitochondrial membrane potential can induce mitophagy, involving the kinase PINK1 and the E3 ligase Parkin. PINK1 serves as the sensor for the mitochondrial depolarization and recruits Parkin, followed by ubiquitin-dependent recruitment of mitophagy receptors. There are also several PINK1/Parkin-independent mitophagy pathways, in which a group of LIR-containing receptors are required in response to different stimuli. Mitophagy contributes to the maintenance of a healthy mitochondrial network and the prevention of programmed cell death.
Class
Cellular Processes; Transport and catabolism
Pathway map
shx04137  Mitophagy - animal
shx04137

Other DBs
GO: 0000422
Organism
Schistosoma haematobium (urinary blood fluke) [GN:shx]
Gene
MS3_00002629  PINK1; Kinase 1 [KO:K05688] [EC:2.7.11.1]
MS3_00007680  TOMM40L; Mitochondrial import receptor subunit TOM40B [KO:K11518]
MS3_00009500  TOMM70A; Mitochondrial import receptor subunit TOM70 [KO:K17768]
MS3_00005306  MARCH5_1; E3 ubiquitin-protein ligase march5, variant 2 [KO:K10660] [EC:2.3.2.27]
MS3_00005372  hypothetical protein [KO:K10636] [EC:2.3.2.36]
MS3_00005742  SIAH1; E3 ubiquitin-protein ligase Siah1 [KO:K04506] [EC:2.3.2.27]
MS3_00004242  ARIH1_1; E3 ubiquitin-protein ligase arih1 [KO:K11968] [EC:2.3.2.31]
MS3_00001582  MFN2; Mitofusin-2 [KO:K06030] [EC:3.6.5.-]
MS3_00011052  RHOT2; Mitochondrial Rho GTPase 2 [KO:K07870] [EC:3.6.5.-]
MS3_00007038  RPL40; ubiquitin fusion protein [KO:K02927]
MS3_00010060  hypothetical protein [KO:K08341]
MS3_00006688  BECN1_1; Beclin-1 [KO:K08334]
MS3_00006464  USP30_1; Ubiquitin carboxyl-terminal hydrolase 30, variant 2 [KO:K11851] [EC:3.4.19.12]
MS3_00003407  PGAM5_1; Serine/threonine-protein phosphatase pgam5, mitochondrial, variant 2 [KO:K15637] [EC:3.1.3.16]
MS3_00004136  CSNK2A1_1; Casein kinase II subunit alpha [KO:K03097] [EC:2.7.11.1]
MS3_00008483  CSNK2B; Casein kinase II subunit beta [KO:K03115]
MS3_00010229  FKBP8; Peptidyl-prolyl cis-trans isomerase fkbp8 [KO:K09574] [EC:5.2.1.8]
MS3_00004310  PHB2_1; Prohibitin-2, subunit of the prohibitin complex (Phb1p-Phb2p), variant 3 [KO:K17081]
MS3_00003502  EIF2S1_1; Eukaryotic translation initiation factor 2 subunit 1, variant 2 [KO:K03237]
MS3_00005146  hypothetical protein [KO:K07827]
MS3_00005637  hypothetical protein [KO:K07831]
MS3_00007689  RABGEF1_1; Rab5 GDP/GTP exchange factor, variant 3 [KO:K20131]
MS3_00009551  MON1B_2; Vacuolar fusion protein mon1b, variant 2 [KO:K20195]
MS3_00010354  CCZ1_2; vacuolar fusion protein ccz1 [KO:K27045]
MS3_00001727  RAB7A_1; Ras- protein Rab-7A [KO:K07897]
MS3_00000834  FIS1_1; mitochondrial membrane protein [KO:K17969]
MS3_00001455  FIS1_2; mitochondrial membrane protein [KO:K17969]
MS3_00007891  ATG9A; Autophagy- protein 9A [KO:K17907]
MS3_00001506  OPA1_1; Dynamin-like protein, mitochondrial, variant 3 [KO:K17079] [EC:3.6.5.5]
MS3_00003920  hypothetical protein [KO:K13525]
Compound
C00035  GDP
C00044  GTP
Reference
  Authors
Pickrell AM, Youle RJ
  Title
The roles of PINK1, parkin, and mitochondrial fidelity in Parkinson's disease.
  Journal
Neuron 85:257-73 (2015)
DOI:10.1016/j.neuron.2014.12.007
Reference
  Authors
Durcan TM, Fon EA
  Title
The three 'P's of mitophagy: PARKIN, PINK1, and post-translational modifications.
  Journal
Genes Dev 29:989-99 (2015)
DOI:10.1101/gad.262758.115
Reference
  Authors
Shirihai OS, Song M, Dorn GW 2nd
  Title
How mitochondrial dynamism orchestrates mitophagy.
  Journal
Circ Res 116:1835-49 (2015)
DOI:10.1161/CIRCRESAHA.116.306374
Reference
  Authors
Hamacher-Brady A, Brady NR
  Title
Mitophagy programs: mechanisms and physiological implications of mitochondrial targeting by autophagy.
  Journal
Cell Mol Life Sci 73:775-95 (2016)
DOI:10.1007/s00018-015-2087-8
Reference
  Authors
Yamano K, Matsuda N, Tanaka K
  Title
The ubiquitin signal and autophagy: an orchestrated dance leading to mitochondrial degradation.
  Journal
EMBO Rep 17:300-16 (2016)
DOI:10.15252/embr.201541486
Reference
  Authors
Yamaguchi O, Murakawa T, Nishida K, Otsu K
  Title
Receptor-mediated mitophagy.
  Journal
J Mol Cell Cardiol 95:50-6 (2016)
DOI:10.1016/j.yjmcc.2016.03.010
Reference
  Authors
Roberts RF, Tang MY, Fon EA, Durcan TM
  Title
Defending the mitochondria: The pathways of mitophagy and mitochondrial-derived vesicles.
  Journal
Int J Biochem Cell Biol 79:427-436 (2016)
DOI:10.1016/j.biocel.2016.07.020
Reference
  Authors
Arena G, Valente EM
  Title
PINK1 in the limelight: multiple functions of an eclectic protein in human health and disease.
  Journal
J Pathol 241:251-263 (2017)
DOI:10.1002/path.4815
Related
pathway
shx04140  Autophagy - animal
KO pathway
ko04137   
LinkDB

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