KEGG   PATHWAY: siy00630
Entry
siy00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Sulfolobus islandicus Y.G.57.14
Class
Metabolism; Carbohydrate metabolism
Pathway map
siy00630  Glyoxylate and dicarboxylate metabolism
siy00630

Module
siy_M00012  Glyoxylate cycle [PATH:siy00630]
siy_M00621  Glycine cleavage system [PATH:siy00630]
siy_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:siy00630]
Other DBs
GO: 0046487 0043648
Organism
Sulfolobus islandicus Y.G.57.14 [GN:siy]
Gene
YG5714_0575  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
YG5714_0775  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_0831  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_0994  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_1014  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_0033  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_0584  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_0595  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_2596  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
YG5714_0827  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
YG5714_0576  malate synthase [KO:K01638] [EC:2.3.3.9]
YG5714_2905  Lactate/malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
YG5714_2901  2-methylcitrate synthase/citrate synthase II [KO:K01647] [EC:2.3.3.1]
YG5714_1127  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
YG5714_0817  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
YG5714_1016  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
YG5714_1017  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
YG5714_0177  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
YG5714_2586  Thiolase [KO:K00626] [EC:2.3.1.9]
YG5714_2863  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
YG5714_1590  acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) (AcaB-1) [KO:K00626] [EC:2.3.1.9]
YG5714_2791  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
YG5714_0819  MaoC domain protein dehydratase [KO:K17865] [EC:4.2.1.55]
YG5714_1067  MaoC domain protein dehydratase [KO:K17865] [EC:4.2.1.55]
YG5714_0220  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
YG5714_0257  Carbamoyl-phosphate synthase L chain ATP-binding [KO:K01964] [EC:6.4.1.2 6.4.1.3]
YG5714_0255  carboxyl transferase [KO:K15036] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
YG5714_0256  biotin/lipoyl attachment domain-containing protein [KO:K15037]
YG5714_0078  cobalamin B12-binding domain protein [KO:K01849] [EC:5.4.99.2]
YG5714_0219  methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
YG5714_2336  FAD linked oxidase domain protein [KO:K00104] [EC:1.1.99.14]
YG5714_0383  FAD linked oxidase domain protein [KO:K00104] [EC:1.1.99.14]
YG5714_2156  SPP-like hydrolase [KO:K22223] [EC:3.1.3.18]
YG5714_1853  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
YG5714_0235  glutamine synthetase catalytic region [KO:K01915] [EC:6.3.1.2]
YG5714_2928  Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
YG5714_1587  Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
YG5714_1297  Glycine dehydrogenase (decarboxylating) [KO:K00282] [EC:1.4.4.2]
YG5714_1298  Glycine dehydrogenase (decarboxylating) [KO:K00283] [EC:1.4.4.2]
YG5714_1296  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
YG5714_0803  FAD-dependent pyridine nucleotide-disulphide oxidoreductase [KO:K00382] [EC:1.8.1.4]
YG5714_1101  FAD-dependent pyridine nucleotide-disulphide oxidoreductase [KO:K00382] [EC:1.8.1.4]
YG5714_2924  FAD-dependent pyridine nucleotide-disulphide oxidoreductase [KO:K00382] [EC:1.8.1.4]
YG5714_1295  glycine cleavage system H protein [KO:K02437]
YG5714_1154  glycine cleavage H-protein [KO:K02437]
YG5714_1118  glycine cleavage H-protein [KO:K02437]
YG5714_1475  Hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
YG5714_1188  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
YG5714_2625  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
siy00010  Glycolysis / Gluconeogenesis
siy00020  Citrate cycle (TCA cycle)
siy00030  Pentose phosphate pathway
siy00053  Ascorbate and aldarate metabolism
siy00071  Fatty acid degradation
siy00230  Purine metabolism
siy00250  Alanine, aspartate and glutamate metabolism
siy00260  Glycine, serine and threonine metabolism
siy00620  Pyruvate metabolism
siy00710  Carbon fixation by Calvin cycle
siy00750  Vitamin B6 metabolism
siy00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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