KEGG   PATHWAY: smil00710
Entry
smil00710                   Pathway                                
Name
Carbon fixation by Calvin cycle - Salvia miltiorrhiza (redroot sage)
Class
Metabolism; Energy metabolism
Pathway map
smil00710  Carbon fixation by Calvin cycle
smil00710

Module
smil_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:smil00710]
smil_M00168  CAM (Crassulacean acid metabolism), dark [PATH:smil00710]
smil_M00169  CAM (Crassulacean acid metabolism), light [PATH:smil00710]
smil_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:smil00710]
smil_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:smil00710]
smil_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:smil00710]
Organism
Salvia miltiorrhiza (redroot sage) [GN:smil]
Gene
14676020  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
18126268  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
131020307  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
131020308  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
131020309  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
130997788  phosphoglycerate kinase, cytosolic-like isoform X1 [KO:K00927] [EC:2.7.2.3]
130986011  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
130986015  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
131008716  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
131025385  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
130995574  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
130985997  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like isoform X1 [KO:K00134] [EC:1.2.1.12]
130987428  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
131021604  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
131021632  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
130995145  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
131011003  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
131025108  fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
130997952  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
130986137  fructose-bisphosphate aldolase 5, cytosolic [KO:K01623] [EC:4.1.2.13]
130986676  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
130986913  fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
131011715  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
131018205  uncharacterized protein LOC131018205 [KO:K03841] [EC:3.1.3.11]
131020638  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
131020639  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
131022036  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
131005853  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
130984986  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
131025140  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
131026338  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
130986474  probable ribose-5-phosphate isomerase 1 [KO:K01807] [EC:5.3.1.6]
131017332  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
131001010  triosephosphate isomerase, chloroplastic-like [KO:K01803] [EC:5.3.1.1]
131005513  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
131016120  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
131020386  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
130992823  uncharacterized protein LOC130992823 isoform X1 [KO:K00616] [EC:2.2.1.2]
130992833  uncharacterized protein LOC130992833 isoform X1 [KO:K00616] [EC:2.2.1.2]
130993143  LOW QUALITY PROTEIN: uncharacterized protein LOC130993143 [KO:K00616] [EC:2.2.1.2]
131024455  phosphoenolpyruvate carboxylase 4 isoform X1 [KO:K01595] [EC:4.1.1.31]
131009160  phosphoenolpyruvate carboxylase 2-like [KO:K01595] [EC:4.1.1.31]
131012072  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
130986903  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
131024931  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
130988336  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
131003280  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
130992567  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
130992694  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
131010634  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
131001783  phosphoenolpyruvate carboxykinase (ATP) 1 isoform X1 [KO:K01610] [EC:4.1.1.49]
131013080  alanine aminotransferase 2, mitochondrial-like [KO:K00814] [EC:2.6.1.2]
130990331  alanine aminotransferase 2-like isoform X1 [KO:K00814] [EC:2.6.1.2]
131025328  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
130991607  pyruvate, phosphate dikinase 2 isoform X1 [KO:K01006] [EC:2.7.9.1]
130992500  NADP-dependent malic enzyme, chloroplastic-like [KO:K00029] [EC:1.1.1.40]
130994415  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
130994842  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
131013181  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
131015355  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
131006293  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
131012291  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
130999789  malate dehydrogenase isoform X1 [KO:K00025] [EC:1.1.1.37]
131001199  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
131020616  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
131008965  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
131012052  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
131012055  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
131001798  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
131020408  malate dehydrogenase, chloroplastic-like isoform X1 [KO:K00026] [EC:1.1.1.37]
131005213  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
130999140  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
131015839  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
smil00010  Glycolysis / Gluconeogenesis
smil00400  Phenylalanine, tyrosine and tryptophan biosynthesis
smil00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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