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Entry
Name
ABC transporters - Sinorhizobium meliloti SM11
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
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Organism
Sinorhizobium meliloti SM11 [GN:
smx ]
Gene
SM11_pC1401 cysP1; ABC-type sulfate transport system, periplasmic component [KO:K02048 ]
SM11_pD0879 cysP2; ABC -type sulfate transport system, periplasmic component [KO:K02047 ]
SM11_pC1382 nrtA; Nitrate transporter, periplasmic nitrate binding protein [KO:K15576 ]
SM11_pD0633 tauC; putative taurine uptake ABC transporter permease protein [KO:K15552 ]
SM11_chr3099 modA; molybdate ABC transporter periplasmic molybdate-binding protein [KO:K02020 ]
SM11_pD0620 putative iron uptake ABC transporter periplasmic solute-binding protein precursor [KO:K02012 ]
SM11_pD0188 putative iron ABC transporter periplasmic solute-binding protein precursor [KO:K02012 ]
SM11_pD1326 putative ABC transporter periplasmic spermidineputrescine-binding protein [KO:K11069 ]
SM11_pD1328 probabable spermidineputrescine ABC transporter permease protein [KO:K11070 ]
SM11_pD1327 probabable spermidineputrescine ABC transporter permease protein [KO:K11071 ]
SM11_chr2861 hutX; Histidine ABC transporter, periplasmic solute-binding protein [KO:K02002 ]
SM11_pD0590 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [KO:K02002 ]
SM11_pD0784 putative choline uptake ABC transporter periplasmic solute-binding protein precursor [KO:K05845 ]
SM11_chr2595 smoK; probabable atp-binding transport abc transporter protein [KO:K10111 ] [EC:7.5.2.-]
SM11_pD0331 putative sugar uptake ABC transporter ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
SM11_pD0555 putative sugar uptake ABC transporter ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
SM11_pD0079 putative sugar uptake ABC transporter ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
SM11_pD1376 putative sugar ABC transporter ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
SM11_pC1290 putative ABC sugar transport ATP binding protein, amino terminus [KO:K10112 ] [EC:7.5.2.-]
SM11_pD0907 putative sugar uptake ABC transporter ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
SM11_pD0250 putative sugar uptake ABC transporter ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
SM11_pD0568 putative sugar uptake ABC transporter ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
SM11_chr0335 aglE; alpha-glucosides-binding periplasmic abc transporter protein [KO:K10232 ]
SM11_chr0336 aglF; alpha-glucosides transport system permease abc transporter protein [KO:K10233 ]
SM11_chr0337 aglG; alpha-glucosides transport system permease abc transporter protein [KO:K10234 ]
SM11_pD0330 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor [KO:K10236 ]
SM11_pD1291 thuE; ThuE, ABC transporter, periplasmic solute-binding protein [KO:K10236 ]
SM11_chr1403 putative gentiobiose, salicin and cellobiose ABC transporter, permease component [KO:K17316 ]
SM11_pD0029 putative sugar ABC transporter periplasmic sugar-binding protein ABC TRANSPORTER [KO:K10439 ]
SM11_pD0191 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor [KO:K10439 ]
SM11_pD0241 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor [KO:K10439 ]
SM11_chr0115 frcA; putative fructose ABC-type transport system, ATPase component [KO:K10554 ]
SM11_chr0267 rhaT; ATP-binding component of rhamnose transport system [KO:K10562 ] [EC:7.5.2.-]
SM11_pD1205 ugpB; probabable ABC transporter periplasmic glycerol-3-phosphate-binding protein precursor [KO:K05813 ]
SM11_pD1204 ugpA; probabable glycerol-3-phosphate ABC transporter permease protein [KO:K05814 ]
SM11_pD1203 ugpE; probabable glycerol-3-phosphate ABC transporter permease protein [KO:K05815 ]
SM11_pD0753 phoD; phosphate uptake ABC transporter periplasmic solute-binding protein precursor [KO:K02044 ]
SM11_chr2090 aapJ; general L-amino acid-binding periplasmic ABC transporter protein [KO:K09969 ]
SM11_chr2091 aapQ; general L-amino acid transport permease ABC transporter protein [KO:K09970 ]
SM11_chr2092 aapM; general L-amino acid transport permease ABC transporter protein [KO:K09971 ]
SM11_chr3402 putative amino-acid transport system permease ABC transporter protein [KO:K10009 ]
SM11_pD1348 putative ABC transporter periplasmic amino acid-binding protein [KO:K23061 ]
SM11_chr2737 livK2; branched chain amino acid ABC transporter periplasmic protein [KO:K01999 ]
SM11_pC0440 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative [KO:K01999 ]
SM11_chr2740 livH2; putative high-affinity branched-chain amino acid transport permease ABC transporter protein [KO:K01997 ]
SM11_chr2640 livH; high-affinity branched-chain amino acid transport permease ABC transporter protein [KO:K01997 ]
SM11_pC0442 livG; probabable high-affinity branched-chain amino acid transport atp-binding abc transporter protein [KO:K01995 K01998 ]
SM11_chr2639 livM; High-affinity branched-chain amino acid transport system permease protein livM [KO:K01998 ]
SM11_chr2738 livG2; putative high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein [KO:K01995 ]
SM11_chr2638 livG; probabable high-affinity branched-chain amino acid transport atp-binding abc transporter protein [KO:K01995 ]
SM11_pD0149 putative branched-chain amino acid uptake ABC transporter ATP-binding protein [KO:K01996 ]
SM11_chr2739 livF2; putative high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein [KO:K01996 ]
SM11_chr2637 livF; high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein [KO:K01996 ]
SM11_pC0443 livF; ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase [KO:K01996 ]
SM11_chr3061 metI; probabable D-methionine transport system permease protein metI [KO:K02072 ]
SM11_chr1418 znuB; high-affinity zinc uptake system membrane ABC transporter protein [KO:K09816 ]
SM11_chr3205 sitA; Manganese ABC transporter periplasmic substrate binding protein [KO:K11604 ]
SM11_pD0987 rkpT2; putative cell surface polysaccharide export ABC-2 transporter permease protein, close relative to wzm1Y20833 [KO:K09688 ]
SM11_chr3361 ccmD; putative HEME exporter D (cytochrome C-type biogenesis protein) transmembrane [KO:K02196 ]
SM11_chr3360 ccmC; putative HEME exporter C (cytochrome C-type biogenesis protein) transmembrane [KO:K02195 ]
SM11_chr3359 ccmB; putative HEME exporter B (cytochrome C-type biogenesis protein) transmembrane [KO:K02194 ]
SM11_chr3358 ccmA; putative heme exporter a (cytochrome c-type biogenesis atp-binding protein) abc transporter [KO:K02193 ] [EC:7.6.2.5 ]
SM11_chr1251 macB; probabable macrolide export ATP-binding/permease protein macB [KO:K05685 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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