KEGG   PATHWAY: sspl00630
Entry
sspl00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Salvia splendens (scarlet sage)
Class
Metabolism; Carbohydrate metabolism
Pathway map
sspl00630  Glyoxylate and dicarboxylate metabolism
sspl00630

Module
sspl_M00012  Glyoxylate cycle [PATH:sspl00630]
sspl_M00532  Photorespiration [PATH:sspl00630]
sspl_M00621  Glycine cleavage system [PATH:sspl00630]
Other DBs
GO: 0046487 0043648
Organism
Salvia splendens (scarlet sage) [GN:sspl]
Gene
121758237  isocitrate lyase-like [KO:K01637] [EC:4.1.3.1]
121754167  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
121810909  isocitrate lyase-like [KO:K01637] [EC:4.1.3.1]
121756780  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
121762092  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
121765323  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
121799814  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
121776548  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
121796084  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
121797029  LOW QUALITY PROTEIN: acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
121787809  malate synthase, glyoxysomal-like [KO:K01638] [EC:2.3.3.9]
121805115  malate synthase, glyoxysomal-like [KO:K01638] [EC:2.3.3.9]
121783687  malate synthase, glyoxysomal-like [KO:K01638] [EC:2.3.3.9]
121811310  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
121745115  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
121789165  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
121802209  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
121802431  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
121751942  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
121806229  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
121808572  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
121785006  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
121786070  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
121773209  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
121773289  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
121774232  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
121761888  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
121775998  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
121802610  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
121777284  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
121803934  malate dehydrogenase-like [KO:K00026] [EC:1.1.1.37]
121805371  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
121806703  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
121780294  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
121782869  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
121756534  citrate synthase, glyoxysomal isoform X1 [KO:K01647] [EC:2.3.3.1]
121759346  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
121777656  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
121804813  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
121805111  citrate synthase, mitochondrial isoform X1 [KO:K01647] [EC:2.3.3.1]
121808545  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
121809548  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
121758955  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
121773951  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
121777160  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
121755180  aconitate hydratase, cytoplasmic isoform X1 [KO:K01681] [EC:4.2.1.3]
121743720  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
121744984  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
121758207  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
121776322  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
121741941  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
121753586  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
121785491  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
121759609  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
121802159  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
121783174  (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
121755817  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
121810087  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
121762718  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
121803675  catalase-like [KO:K03781] [EC:1.11.1.6]
121792893  catalase-like [KO:K03781] [EC:1.11.1.6]
121765875  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
121807921  catalase-like [KO:K03781] [EC:1.11.1.6]
121755011  catalase-like [KO:K03781] [EC:1.11.1.6]
121793421  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
121795123  glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
121795124  glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
121744532  glyoxylate/succinic semialdehyde reductase 1-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
121780257  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
121741852  glyoxylate/succinic semialdehyde reductase 1-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
121783071  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
121788618  glycerate dehydrogenase HPR, peroxisomal [KO:K15893] [EC:1.1.1.29]
121804542  glycerate dehydrogenase HPR, peroxisomal-like [KO:K15893] [EC:1.1.1.29]
121808168  glycerate dehydrogenase HPR, peroxisomal-like [KO:K15893] [EC:1.1.1.29]
121811381  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
121745064  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
121762062  phosphoglycolate phosphatase 1A, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
121765393  phosphoglycolate phosphatase 1A, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
59436037  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
121788943  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
121746789  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
121787064  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
121787065  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
121761614  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
121748909  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
121747953  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
121762328  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
121751569  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
121796957  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
121771524  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
121771525  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
121768294  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
121768295  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
121799482  ferredoxin-dependent glutamate synthase, chloroplastic-like [KO:K00284] [EC:1.4.7.1]
121795818  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
121785013  glutamine synthetase cytosolic isozyme 2-like [KO:K01915] [EC:6.3.1.2]
121772742  glutamine synthetase cytosolic isozyme-like [KO:K01915] [EC:6.3.1.2]
121787306  glutamine synthetase cytosolic isozyme 2-like [KO:K01915] [EC:6.3.1.2]
121775035  glutamine synthetase cytosolic isozyme [KO:K01915] [EC:6.3.1.2]
121777473  glutamine synthetase cytosolic isozyme-like [KO:K01915] [EC:6.3.1.2]
121805477  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
121808367  glutamine synthetase, chloroplastic-like [KO:K01915] [EC:6.3.1.2]
121741846  glutamine synthetase, chloroplastic-like [KO:K01915] [EC:6.3.1.2]
121783466  glutamine synthetase, chloroplastic [KO:K01915] [EC:6.3.1.2]
121809870  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
121784750  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
121745007  serine hydroxymethyltransferase 6-like [KO:K00600] [EC:2.1.2.1]
121799846  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
121773290  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
121802117  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
121777700  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
121792776  serine hydroxymethyltransferase 2, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
121779867  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
121751989  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
121808023  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
121742066  serine hydroxymethyltransferase 6-like [KO:K00600] [EC:2.1.2.1]
121753867  serine hydroxymethyltransferase 2, mitochondrial [KO:K00600] [EC:2.1.2.1]
121782507  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
121796104  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
121745096  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
121804849  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
121742170  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
121773887  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
121776590  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
121810708  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
121771820  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
121771955  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
121799806  dihydrolipoyl dehydrogenase 2, chloroplastic isoform X1 [KO:K00382] [EC:1.8.1.4]
121801228  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
121801853  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
121749036  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
121792318  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
121807320  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
121767638  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
121768138  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
121796082  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
121773486  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
121787478  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
121788692  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
121775983  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
121791110  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
121791285  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
121778509  glycine cleavage system H protein, mitochondrial-like isoform X1 [KO:K02437]
121767101  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
121780928  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
121783864  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
121805983  LOW QUALITY PROTEIN: D-glycerate 3-kinase, chloroplastic-like [KO:K15918] [EC:2.7.1.31]
121808415  D-glycerate 3-kinase, chloroplastic-like [KO:K15918] [EC:2.7.1.31]
121775038  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
121776036  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
121791490  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
121799346  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
121787024  formamidase-like isoform X1 [KO:K01455] [EC:3.5.1.49]
121748812  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
121778277  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
121751323  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
121782471  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sspl00010  Glycolysis / Gluconeogenesis
sspl00020  Citrate cycle (TCA cycle)
sspl00030  Pentose phosphate pathway
sspl00053  Ascorbate and aldarate metabolism
sspl00071  Fatty acid degradation
sspl00230  Purine metabolism
sspl00250  Alanine, aspartate and glutamate metabolism
sspl00260  Glycine, serine and threonine metabolism
sspl00620  Pyruvate metabolism
sspl00710  Carbon fixation by Calvin cycle
sspl00750  Vitamin B6 metabolism
sspl00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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