KEGG   PATHWAY: stub00362
Entry
stub00362                   Pathway                                
Name
Benzoate degradation - Streptomyces tubbatahanensis
Class
Metabolism; Xenobiotics biodegradation and metabolism
Pathway map
stub00362  Benzoate degradation
stub00362

Other DBs
UMBBD: benz2 benz abs
GO: 0043639
Organism
Streptomyces tubbatahanensis [GN:stub]
Gene
MMF93_27115  pcaC; 4-carboxymuconolactone decarboxylase [KO:K14727] [EC:3.1.1.24 4.1.1.44]
MMF93_29165  alpha/beta fold hydrolase [KO:K14727] [EC:3.1.1.24 4.1.1.44]
MMF93_26150  acetyl-CoA C-acyltransferase [KO:K00632] [EC:2.3.1.16]
MMF93_10000  lipid-transfer protein [KO:K00632] [EC:2.3.1.16]
MMF93_22405  2-keto-4-pentenoate hydratase [KO:K02554] [EC:4.2.1.80]
MMF93_22415  dmpG; 4-hydroxy-2-oxovalerate aldolase [KO:K01666] [EC:4.1.3.39]
MMF93_22410  acetaldehyde dehydrogenase (acetylating) [KO:K04073] [EC:1.2.1.10]
MMF93_29175  pcaG; protocatechuate 3,4-dioxygenase subunit alpha [KO:K00448] [EC:1.13.11.3]
MMF93_29180  pcaH; protocatechuate 3,4-dioxygenase subunit beta [KO:K00449] [EC:1.13.11.3]
MMF93_29170  pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [KO:K01857] [EC:5.5.1.2]
MMF93_31845  amidohydrolase family protein [KO:K10221] [EC:3.1.1.57]
MMF93_31860  4-oxalomesaconate tautomerase [KO:K16514] [EC:5.3.2.8]
MMF93_31855  amidohydrolase [KO:K10220] [EC:4.2.1.83]
MMF93_31850  ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase [KO:K10218] [EC:4.1.3.17]
MMF93_08645  FAD-dependent oxidoreductase [KO:K00529] [EC:1.18.1.3]
MMF93_10580  FAD-dependent oxidoreductase [KO:K00529] [EC:1.18.1.3]
MMF93_29160  4-hydroxybenzoate 3-monooxygenase [KO:K00481] [EC:1.14.13.2]
MMF93_28525  aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [KO:K04116] [EC:6.2.1.-]
MMF93_28635  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
MMF93_06755  acyl-CoA dehydrogenase family protein [KO:K00252] [EC:1.3.8.6]
MMF93_23410  enoyl-CoA hydratase-related protein [KO:K01692] [EC:4.2.1.17]
MMF93_23070  3-hydroxyacyl-CoA dehydrogenase family protein [KO:K00074] [EC:1.1.1.157]
MMF93_29320  3-hydroxyacyl-CoA dehydrogenase [KO:K00074] [EC:1.1.1.157]
MMF93_05625  3-hydroxybutyryl-CoA dehydrogenase [KO:K00074] [EC:1.1.1.157]
MMF93_27350  3-hydroxybutyryl-CoA dehydrogenase [KO:K00074] [EC:1.1.1.157]
MMF93_22500  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
MMF93_23160  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
MMF93_28630  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
MMF93_29310  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
MMF93_31695  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MMF93_04335  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
MMF93_10170  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MMF93_13560  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
MMF93_19105  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00036  Oxaloacetate
C00084  Acetaldehyde
C00090  Catechol
C00091  Succinyl-CoA
C00146  Phenol
C00156  4-Hydroxybenzoate
C00180  Benzoate
C00196  2,3-Dihydroxybenzoate
C00230  3,4-Dihydroxybenzoate
C00332  Acetoacetyl-CoA
C00512  Benzoyl-CoA
C00527  Glutaryl-CoA
C00530  Hydroquinone
C00587  3-Hydroxybenzoate
C00596  2-Hydroxy-2,4-pentadienoate
C00628  2,5-Dihydroxybenzoate
C00682  2-Hydroxymuconate semialdehyde
C00846  3-Oxoadipate
C00877  Crotonoyl-CoA
C01063  Pimeloyl-CoA
C01144  (S)-3-Hydroxybutanoyl-CoA
C01163  3-Carboxy-cis,cis-muconate
C01278  2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate
C01407  Benzene
C01751  Resorcinol
C02222  2-Maleylacetate
C02232  3-Oxoadipyl-CoA
C02411  Glutaconyl-1-CoA
C02480  cis,cis-Muconate
C02501  2-Hydroxymuconate
C02519  4-Methoxybenzoate
C02814  Benzene-1,2,4-triol
C02949  4-Hydroxybenzoyl-CoA
C03453  gamma-Oxalocrotonate
C03586  2-Oxo-2,3-dihydrofuran-5-acetate
C03589  4-Hydroxy-2-oxopentanoate
C03671  2-Pyrone-4,6-dicarboxylate
C03676  3-Hydroxy-cis,cis-muconate
C03767  4-Oxocyclohexanecarboxylate
C04091  cis-1,2-Dihydrobenzene-1,2-diol
C04115  4-Carboxy-4-hydroxy-2-oxoadipate
C04324  (1E,3E)-4-Hydroxybuta-1,3-diene-1,2,4-tricarboxylate
C04404  trans-4-Hydroxycyclohexanecarboxylate
C04434  (1E)-4-Oxobut-1-ene-1,2,4-tricarboxylate
C04480  3-Carboxy-2-hydroxymuconate semialdehyde
C04484  4-Carboxy-2-hydroxymuconate semialdehyde
C04553  3-Carboxy-2,5-dihydro-5-oxofuran-2-acetate
C05375  2-Hydroxy-2-hydropyrone-4,6-dicarboxylate
C06033  Parapyruvate
C06035  4-Methylene-2-oxoglutarate
C06321  (1R,6S)-1,6-Dihydroxycyclohexa-2,4-diene-1-carboxylate
C06322  Cyclohexa-1,5-diene-1-carbonyl-CoA
C06333  2-Aminobenzenesulfonate
C06336  3-Sulfocatechol
C06714  3-Hydroxypimeloyl-CoA
C06715  3-Oxopimeloyl-CoA
C06723  6-Carboxyhex-2-enoyl-CoA
C06749  6-Hydroxycyclohex-1-ene-1-carbonyl-CoA
C09809  Cyclohexa-2,5-diene-1-carbonyl-CoA
C09810  Cyclohexa-1,4-diene-1-carbonyl-CoA
C09811  Cyclohex-1-ene-1-carbonyl-CoA
C09812  2-Hydroxycyclohexane-1-carbonyl-CoA
C09813  2-Oxocyclohexane-1-carbonyl-CoA
C09821  6-Oxocyclohex-1-ene-1-carbonyl-CoA
C09822  Cyclohexane-1-carboxylate
C09823  Cyclohexane-1-carbonyl-CoA
C14144  5-Carboxy-2-pentenoyl-CoA
C14610  (S)-5-Oxo-2,5-dihydrofuran-2-acetate
C19682  3,4-Didehydroadipyl-CoA
C19683  3,4-Didehydroadipyl-CoA semialdehyde
C19684  2,3-Epoxy-2,3-dihydrobenzoyl-CoA
C21298  2,6-Dihydroxybenzoate
C22885  cis-4-Hydroxycyclohexane-1-carboxylate
C22887  4-Oxocyclohex-2-ene-1-carboxylate
C22920  4-Oxocyclohex-2,5-dienecarboxylate
Reference
  Authors
Carmona M, Zamarro MT, Blazquez B, Durante-Rodriguez G, Juarez JF, Valderrama JA, Barragan MJ, Garcia JL, Diaz E
  Title
Anaerobic catabolism of aromatic compounds: a genetic and genomic view.
  Journal
Microbiol Mol Biol Rev 73:71-133 (2009)
DOI:10.1128/MMBR.00021-08
Reference
  Authors
Hara H, Masai E, Miyauchi K, Katayama Y, Fukuda M.
  Title
Characterization of the 4-carboxy-4-hydroxy-2-oxoadipate aldolase gene and operon structure of the protocatechuate 4,5-cleavage pathway genes in Sphingomonas paucimobilis SYK-6.
  Journal
J Bacteriol 185:41-50 (2003)
DOI:10.1128/JB.185.1.41-50.2003
Reference
  Authors
Maruyama K, Shibayama T, Ichikawa A, Sakou Y, Yamada S, Sugisaki H.
  Title
Cloning and characterization of the genes encoding enzymes for the protocatechuate meta-degradation pathway of Pseudomonas ochraceae NGJ1.
  Journal
Biosci Biotechnol Biochem 68:1434-41 (2004)
DOI:10.1271/bbb.68.1434
Reference
  Authors
Mampel J, Ruff J, Junker F, Cook AM.
  Title
The oxygenase component of the 2-aminobenzenesulfonate dioxygenase system from Alcaligenes sp. strain O-1.
  Journal
Microbiology 145 ( Pt 11):3255-64 (1999)
DOI:10.1099/00221287-145-11-3255
Reference
PMID:8002948
  Authors
Junker F, Field JA, Bangerter F, Ramsteiner K, Kohler HP, Joannou CL, Mason JR, Leisinger T, Cook AM.
  Title
Oxygenation and spontaneous deamination of 2-aminobenzenesulphonic acid in Alcaligenes sp. strain O-1 with subsequent meta ring cleavage and spontaneous desulphonation to 2-hydroxymuconic acid.
  Journal
Biochem J 300 ( Pt 2):429-36 (1994)
DOI:10.1042/bj3000429
Reference
PMID:8990279
  Authors
Harwood CS, Gibson J.
  Title
Shedding light on anaerobic benzene ring degradation: a process unique to prokaryotes?
  Journal
J Bacteriol 179:301-9 (1997)
DOI:10.1128/JB.179.2.301-309.1997
Reference
  Authors
Peters F, Shinoda Y, McInerney MJ, Boll M.
  Title
Cyclohexa-1,5-diene-1-carbonyl-coenzyme A (CoA) hydratases of Geobacter metallireducens and Syntrophus aciditrophicus: Evidence for a common benzoyl-CoA degradation pathway in facultative and strict anaerobes.
  Journal
J Bacteriol 189:1055-60 (2007)
DOI:10.1128/JB.01467-06
Reference
  Authors
Cowles CE, Nichols NN, Harwood CS.
  Title
BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida.
  Journal
J Bacteriol 182:6339-46 (2000)
DOI:10.1128/JB.182.22.6339-6346.2000
Reference
  Authors
Smith MA, Weaver VB, Young DM, Ornston LN.
  Title
Genes for chlorogenate and hydroxycinnamate catabolism (hca) are linked to functionally related genes in the dca-pca-qui-pob-hca chromosomal cluster of Acinetobacter sp. strain ADP1.
  Journal
Appl Environ Microbiol 69:524-32 (2003)
DOI:10.1128/AEM.69.1.524-532.2003
Reference
  Authors
Kuntze K, Shinoda Y, Moutakki H, McInerney MJ, Vogt C, Richnow HH, Boll M
  Title
6-Oxocyclohex-1-ene-1-carbonyl-coenzyme A hydrolases from obligately anaerobic bacteria: characterization and identification of its gene as a functional marker for aromatic compounds degrading anaerobes.
  Journal
Environ Microbiol 10:1547-56 (2008)
DOI:10.1111/j.1462-2920.2008.01570.x
Reference
  Authors
Pelletier DA, Harwood CS
  Title
2-Hydroxycyclohexanecarboxyl coenzyme A dehydrogenase, an enzyme characteristic of the anaerobic benzoate degradation pathway used by Rhodopseudomonas palustris.
  Journal
J Bacteriol 182:2753-60 (2000)
DOI:10.1128/JB.182.10.2753-2760.2000
Reference
  Authors
Elshahed MS, Bhupathiraju VK, Wofford NQ, Nanny MA, McInerney MJ
  Title
Metabolism of benzoate, cyclohex-1-ene carboxylate, and cyclohexane carboxylate by "Syntrophus aciditrophicus" strain SB in syntrophic association with H(2)-using microorganisms.
  Journal
Appl Environ Microbiol 67:1728-38 (2001)
DOI:10.1128/AEM.67.4.1728-1738.2001
Reference
  Authors
Nogales J, Canales A, Jimenez-Barbero J, Serra B, Pingarron JM, Garcia JL, Diaz E
  Title
Unravelling the gallic acid degradation pathway in bacteria: the gal cluster from Pseudomonas putida.
  Journal
Mol Microbiol 79:359-74 (2011)
DOI:10.1111/j.1365-2958.2010.07448.x
Related
pathway
stub00010  Glycolysis / Gluconeogenesis
stub00020  Citrate cycle (TCA cycle)
stub00350  Tyrosine metabolism
stub00360  Phenylalanine metabolism
stub00361  Chlorocyclohexane and chlorobenzene degradation
stub00627  Aminobenzoate degradation
stub00790  Folate biosynthesis
KO pathway
ko00362   
LinkDB

DBGET integrated database retrieval system