KEGG   PATHWAY: thm00970
Entry
thm00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Thermococcus cleftensis
Class
Genetic Information Processing; Translation
Pathway map
thm00970  Aminoacyl-tRNA biosynthesis
thm00970

Organism
Thermococcus cleftensis [GN:thm]
Gene
CL1_t0005  tRNA-Ala [KO:K14218]
CL1_t0033  tRNA-Ala [KO:K14218]
CL1_t0034  tRNA-Ala [KO:K14218]
CL1_t0043  tRNA-Arg [KO:K14219]
CL1_t0035  tRNA-Arg [KO:K14219]
CL1_t0008  tRNA-Arg [KO:K14219]
CL1_t0017  tRNA-Arg [KO:K14219]
CL1_t0015  tRNA-Arg [KO:K14219]
CL1_t0010  tRNA-Asn [KO:K14220]
CL1_t0023  tRNA-Asp [KO:K14221]
CL1_t0013  tRNA-Cys [KO:K14222]
CL1_t0028  tRNA-Gln [KO:K14223]
CL1_t0025  tRNA-Gln [KO:K14223]
CL1_t0046  tRNA-Glu [KO:K14224]
CL1_t0027  tRNA-Glu [KO:K14224]
CL1_t0016  tRNA-Gly [KO:K14225]
CL1_t0032  tRNA-Gly [KO:K14225]
CL1_t0037  tRNA-Gly [KO:K14225]
CL1_t0029  tRNA-His [KO:K14226]
CL1_t0026  tRNA-Ile [KO:K14227]
CL1_t0040  tRNA-Leu [KO:K14228]
CL1_t0020  tRNA-Leu [KO:K14228]
CL1_t0039  tRNA-Leu [KO:K14228]
CL1_t0014  tRNA-Leu [KO:K14228]
CL1_t0018  tRNA-Leu [KO:K14228]
CL1_t0022  tRNA-Lys [KO:K14229]
CL1_t0041  tRNA-Lys [KO:K14229]
CL1_t0002  tRNA-Met [KO:K14230]
CL1_t0042  tRNA-Met [KO:K14230]
CL1_t0011  tRNA-Met [KO:K14230]
CL1_t0038  tRNA-Phe [KO:K14231]
CL1_t0006  tRNA-Pro [KO:K14232]
CL1_t0019  tRNA-Pro [KO:K14232]
CL1_t0024  tRNA-Pro [KO:K14232]
CL1_t0021  tRNA-Ser [KO:K14233]
CL1_t0003  tRNA-Ser [KO:K14233]
CL1_t0012  tRNA-Ser [KO:K14233]
CL1_t0044  tRNA-Ser [KO:K14233]
CL1_t0045  tRNA-Thr [KO:K14234]
CL1_t0009  tRNA-Thr [KO:K14234]
CL1_t0007  tRNA-Thr [KO:K14234]
CL1_t0031  tRNA-Trp [KO:K14235]
CL1_t0030  tRNA-Tyr [KO:K14236]
CL1_t0004  tRNA-Val [KO:K14237]
CL1_t0001  tRNA-Val [KO:K14237]
CL1_t0036  tRNA-Val [KO:K14237]
CL1_0410  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
CL1_0286  glutamyl-tRNA(Gln) amidotransferase subunit D [KO:K09482] [EC:6.3.5.7]
CL1_0287  glutamyl-tRNA(Gln) amidotransferase subunit E [KO:K03330] [EC:6.3.5.7]
CL1_0957  alanyl-tRNA synthetase 2 [KO:K01872] [EC:6.1.1.7]
CL1_0927  alanyl-tRNA synthetase 1 [KO:K01872] [EC:6.1.1.7]
CL1_1300  alanyl-tRNA synthetase-like protein [KO:K01872] [EC:6.1.1.7]
CL1_1810  hypothetical protein containing alanyl tRNA synthase domain [KO:K01872] [EC:6.1.1.7]
CL1_0358  aspartyl-tRNA synthetase [KO:K22503] [EC:6.1.1.12]
CL1_1712  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
CL1_0636  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
CL1_0090  glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
CL1_0307  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
CL1_1593  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
CL1_0029  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
CL1_0110  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
CL1_2026  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
CL1_0558  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
CL1_0874  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
CL1_1329  lysyl-tRNA synthetase [KO:K04566] [EC:6.1.1.6]
CL1_0179  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
CL1_0119  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
CL1_0963  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
CL1_0342  phenylalanyl-tRNA synthetase alpha subunit [KO:K01889] [EC:6.1.1.20]
CL1_0339  phenylalanyl-tRNA synthetase beta subunit [KO:K01890] [EC:6.1.1.20]
CL1_1689  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
CL1_1035  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
thm00250  Alanine, aspartate and glutamate metabolism
thm00260  Glycine, serine and threonine metabolism
thm00270  Cysteine and methionine metabolism
thm00290  Valine, leucine and isoleucine biosynthesis
thm00300  Lysine biosynthesis
thm00330  Arginine and proline metabolism
thm00340  Histidine metabolism
thm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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