KEGG   PATHWAY: thu00630
Entry
thu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Thauera humireducens SgZ-1
Class
Metabolism; Carbohydrate metabolism
Pathway map
thu00630  Glyoxylate and dicarboxylate metabolism
thu00630

Module
thu_M00012  Glyoxylate cycle [PATH:thu00630]
thu_M00621  Glycine cleavage system [PATH:thu00630]
Other DBs
GO: 0046487 0043648
Organism
Thauera humireducens SgZ-1 [GN:thu]
Gene
AC731_000035  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AC731_003990  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AC731_018930  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AC731_019020  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
AC731_007925  malate synthase G [KO:K01638] [EC:2.3.3.9]
AC731_003285  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AC731_003320  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
AC731_003225  aconitate hydratase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AC731_016765  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AC731_008115  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AC731_003960  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AC731_008310  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AC731_008475  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AC731_017400  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AC731_000590  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
AC731_000595  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
AC731_010495  (R)-hydratase [KO:K17865] [EC:4.2.1.55]
AC731_011850  acetyl/propionyl-CoA carboxylase subuit alpha [KO:K01965] [EC:6.4.1.3]
AC731_011855  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AC731_011865  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
AC731_004245  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
AC731_004250  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
AC731_004255  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
AC731_016100  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
AC731_006835  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
AC731_018180  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AC731_010050  rbcL; ribulose 1,5-bisphosphate carboxylase [KO:K01601] [EC:4.1.1.39]
AC731_010055  ribulose 1,5-bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
AC731_012485  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AC731_009830  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AC731_007630  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
AC731_007620  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AC731_003335  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AC731_001360  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AC731_007625  glycine cleavage system protein H [KO:K02437]
AC731_008415  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
AC731_008420  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AC731_011375  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AC731_011370  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AC731_014330  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AC731_008425  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AC731_014375  glycerate kinase [KO:K00865] [EC:2.7.1.165]
AC731_008435  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AC731_001670  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AC731_015755  hypothetical protein [KO:K00126] [EC:1.17.1.9]
AC731_015765  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AC731_007930  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AC731_012810  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AC731_007935  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
AC731_015770  formate dehydrogenase [KO:K00124]
AC731_012805  formate dehydrogenase [KO:K00124]
AC731_015775  formate dehydrogenase [KO:K00127]
AC731_012795  formate dehydrogenase subunit gamma [KO:K00127]
AC731_015870  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AC731_016320  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
thu00010  Glycolysis / Gluconeogenesis
thu00020  Citrate cycle (TCA cycle)
thu00030  Pentose phosphate pathway
thu00053  Ascorbate and aldarate metabolism
thu00071  Fatty acid degradation
thu00230  Purine metabolism
thu00250  Alanine, aspartate and glutamate metabolism
thu00260  Glycine, serine and threonine metabolism
thu00620  Pyruvate metabolism
thu00710  Carbon fixation by Calvin cycle
thu00750  Vitamin B6 metabolism
thu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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