KEGG   PATHWAY: tko00970
Entry
tko00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Thermococcus kodakarensis
Class
Genetic Information Processing; Translation
Pathway map
tko00970  Aminoacyl-tRNA biosynthesis
tko00970

Organism
Thermococcus kodakarensis [GN:tko]
Gene
tRNA-Ala-3  tRNA-Ala [KO:K14218]
tRNA-Ala-1  tRNA-Ala [KO:K14218]
tRNA-Ala-2  tRNA-Ala [KO:K14218]
tRNA-Arg-5  tRNA-Arg [KO:K14219]
tRNA-Arg-4  tRNA-Arg [KO:K14219]
tRNA-Arg-3  tRNA-Arg [KO:K14219]
tRNA-Arg-1  tRNA-Arg [KO:K14219]
tRNA-Arg-2  tRNA-Arg [KO:K14219]
tRNA-Asn  tRNA-Asn [KO:K14220]
tRNA-Asp  tRNA-Asp [KO:K14221]
tRNA-Cys  tRNA-Cys [KO:K14222]
tRNA-Gln-1  tRNA-Gln [KO:K14223]
tRNA-Gln-2  tRNA-Gln [KO:K14223]
tRNA-Glu-2  tRNA-Glu [KO:K14224]
tRNA-Glu-1  tRNA-Glu [KO:K14224]
tRNA-Gly-2  tRNA-Gly [KO:K14225]
tRNA-Gly-3  tRNA-Gly [KO:K14225]
tRNA-Gly-1  tRNA-Gly [KO:K14225]
tRNA-His  tRNA-His [KO:K14226]
tRNA-Ile  tRNA-Ile [KO:K14227]
tRNA-Leu-4  tRNA-Leu [KO:K14228]
tRNA-Leu-2  tRNA-Leu [KO:K14228]
tRNA-Leu-1  tRNA-Leu [KO:K14228]
tRNA-Leu-3  tRNA-Leu [KO:K14228]
tRNA-Lys-2  tRNA-Lys [KO:K14229]
tRNA-Lys-1  tRNA-Lys [KO:K14229]
tRNA-Met-2  tRNA-Met [KO:K14230]
tRNA-Met-3  tRNA-Met [KO:K14230]
tRNA-Met-1  tRNA-Met [KO:K14230]
tRNA-Phe  tRNA-Phe [KO:K14231]
tRNA-Pro-3  tRNA-Pro [KO:K14232]
tRNA-Pro-1  tRNA-Pro [KO:K14232]
tRNA-Pro-2  tRNA-Pro [KO:K14232]
tRNA-Ser-2  tRNA-Ser [KO:K14233]
tRNA-Ser-3  tRNA-Ser [KO:K14233]
tRNA-Ser-1  tRNA-Ser [KO:K14233]
tRNA-Ser-4  tRNA-Ser [KO:K14233]
tRNA-Thr-1  tRNA-Thr [KO:K14234]
tRNA-Thr-2  tRNA-Thr [KO:K14234]
tRNA-Thr-3  tRNA-Thr [KO:K14234]
tRNA-Trp  tRNA-Trp [KO:K14235]
tRNA-Tyr  tRNA-Tyr [KO:K14236]
tRNA-Val-1  tRNA-Val [KO:K14237]
tRNA-Val-2  tRNA-Val [KO:K14237]
tRNA-Val-3  tRNA-Val [KO:K14237]
TK1408  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
TK0908  archaeal Glu-tRNA(Gln) amidotransferase, subunit D [KO:K09482] [EC:6.3.5.7]
TK0911  archaeal Glu-tRNA(Gln) amidotransferase, subunit E containing GAD domain [KO:K03330] [EC:6.3.5.7]
TK1567  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
TK0984  alanyl-tRNA synthetase-related protein (partial) [KO:K01872] [EC:6.1.1.7]
TK1607  alanyl-tRNA synthetase-related protein (C-terminus) [KO:K01872] [EC:6.1.1.7]
TK0492  aspartyl-tRNA synthetase [KO:K22503] [EC:6.1.1.12]
TK0759  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
TK1550  asparaginyl-tRNA synthetase-related protein (N-truncation) [KO:K01893] [EC:6.1.1.22]
TK0978  glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
TK1170  Threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
TK1140  Seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
TK0444  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
TK1049  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
TK1274  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
TK1461  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
TK1748  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
TK2240  lysyl-tRNA synthetase [KO:K04566] [EC:6.1.1.6]
TK1235  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
TK0550  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
TK1562  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
TK0921  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
TK0925  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
TK0568  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
TK1874  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
tko00250  Alanine, aspartate and glutamate metabolism
tko00260  Glycine, serine and threonine metabolism
tko00270  Cysteine and methionine metabolism
tko00290  Valine, leucine and isoleucine biosynthesis
tko00300  Lysine biosynthesis
tko00330  Arginine and proline metabolism
tko00340  Histidine metabolism
tko00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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