KEGG   PATHWAY: tpra00710
Entry
tpra00710                   Pathway                                
Name
Carbon fixation by Calvin cycle - Trifolium pratense (red clover)
Class
Metabolism; Energy metabolism
Pathway map
tpra00710  Carbon fixation by Calvin cycle
tpra00710

Module
tpra_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:tpra00710]
tpra_M00168  CAM (Crassulacean acid metabolism), dark [PATH:tpra00710]
tpra_M00169  CAM (Crassulacean acid metabolism), light [PATH:tpra00710]
tpra_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:tpra00710]
tpra_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:tpra00710]
tpra_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:tpra00710]
Organism
Trifolium pratense (red clover) [GN:tpra]
Gene
54614133  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
123907074  ribulose bisphosphate carboxylase small subunit, chloroplastic 3-like [KO:K01602] [EC:4.1.1.39]
123910921  ribulose bisphosphate carboxylase small subunit, chloroplastic [KO:K01602] [EC:4.1.1.39]
123910922  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
123893912  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
123893913  phosphoglycerate kinase 3, cytosolic-like [KO:K00927] [EC:2.7.2.3]
123910912  phosphoglycerate kinase-like isoform X1 [KO:K00927] [EC:2.7.2.3]
123883502  glyceraldehyde-3-phosphate dehydrogenase, cytosolic isoform X1 [KO:K00134] [EC:1.2.1.12]
123887407  glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic [KO:K00134] [EC:1.2.1.12]
123893901  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
123911348  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
123889407  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
123899267  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
123890421  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
123919857  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
123907587  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
123921042  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
123921476  fructose-bisphosphate aldolase, cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
123924424  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
123913895  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
123913896  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
123904161  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
123888437  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
123908637  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
123910661  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
123912773  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
123905809  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
123920233  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
123910668  transketolase, chloroplastic isoform X1 [KO:K00615] [EC:2.2.1.1]
123894879  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
123890824  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
123884932  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
123902741  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
123907618  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
123888725  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
123897178  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
123897257  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
123891375  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
123883037  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
123890757  transaldolase [KO:K00616] [EC:2.2.1.2]
123884503  transaldolase [KO:K00616] [EC:2.2.1.2]
123916043  transaldolase-like isoform X1 [KO:K00616] [EC:2.2.1.2]
123906435  phosphoenolpyruvate carboxylase isoform X1 [KO:K01595] [EC:4.1.1.31]
123920091  phosphoenolpyruvate carboxylase 4-like [KO:K01595] [EC:4.1.1.31]
123893968  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
123895064  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
123904469  phosphoenolpyruvate carboxylase 4-like [KO:K01595] [EC:4.1.1.31]
123899378  aspartate aminotransferase 1 [KO:K14454] [EC:2.6.1.1]
123893633  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
123921479  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
123903736  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
123884072  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
123884089  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
123908296  glutamate--glyoxylate aminotransferase 2 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
123923790  pyruvate, phosphate dikinase 2-like [KO:K01006] [EC:2.7.9.1]
123923791  pyruvate, phosphate dikinase, chloroplastic-like [KO:K01006] [EC:2.7.9.1]
123884315  NADP-dependent malic enzyme 4, chloroplastic [KO:K00029] [EC:1.1.1.40]
123893670  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
123896730  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
123915507  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
123908406  malate dehydrogenase [NADP], chloroplastic isoform X1 [KO:K00051] [EC:1.1.1.82]
123905767  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
123884259  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
123895777  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
123903023  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
123884257  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
123908701  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
123909054  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
123895313  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
123918093  malate dehydrogenase 2, peroxisomal [KO:K00026] [EC:1.1.1.37]
123883315  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
123883456  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
123888227  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
123894345  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
tpra00010  Glycolysis / Gluconeogenesis
tpra00400  Phenylalanine, tyrosine and tryptophan biosynthesis
tpra00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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