KEGG   PATHWAY: tss00630
Entry
tss00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Telopea speciosissima (New South Wales waratah)
Class
Metabolism; Carbohydrate metabolism
Pathway map
tss00630  Glyoxylate and dicarboxylate metabolism
tss00630

Module
tss_M00012  Glyoxylate cycle [PATH:tss00630]
tss_M00532  Photorespiration [PATH:tss00630]
tss_M00621  Glycine cleavage system [PATH:tss00630]
Other DBs
GO: 0046487 0043648
Organism
Telopea speciosissima (New South Wales waratah) [GN:tss]
Gene
122653993  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
122654802  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
122669143  acetate--CoA ligase CCL3-like isoform X1 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
122653594  malate synthase, glyoxysomal isoform X1 [KO:K01638] [EC:2.3.3.9]
122659290  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
122663721  malate dehydrogenase-like isoform X1 [KO:K00025] [EC:1.1.1.37]
122642032  malate dehydrogenase 2, cytoplasmic [KO:K00025] [EC:1.1.1.37]
122657580  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
122662027  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
122651838  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
122640805  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
122667545  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
122651871  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
122642972  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
122661448  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
122639836  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
122641813  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
122659854  acetyl-CoA acetyltransferase, cytosolic 1-like isoform X1 [KO:K00626] [EC:2.3.1.9]
122656083  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
122644229  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
122639774  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
122639776  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
122653184  (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
122657329  catalase-like isoform X1 [KO:K03781] [EC:1.11.1.6]
122657330  catalase [KO:K03781] [EC:1.11.1.6]
122664450  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122664452  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122664453  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122664456  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122666014  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122666015  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122656565  glyoxylate/succinic semialdehyde reductase 2, chloroplastic [KO:K18121] [EC:1.1.1.79 1.1.1.-]
122656468  glyoxylate/succinic semialdehyde reductase 1 isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
122659690  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
122661063  glycerate dehydrogenase-like [KO:K15893] [EC:1.1.1.29]
122671485  phosphoglycolate phosphatase 1A, chloroplastic-like isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
122639420  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
122641035  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
122647532  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
122647688  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
122669713  ribulose bisphosphate carboxylase small subunit, chloroplastic 3-like [KO:K01602] [EC:4.1.1.39]
122671617  ribulose bisphosphate carboxylase small subunit, chloroplastic-like isoform X1 [KO:K01602] [EC:4.1.1.39]
122664244  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
122641644  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
122642177  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
122672852  glutamate--glyoxylate aminotransferase 2 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
122668165  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
122645865  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
122664858  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
122655634  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
122667196  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
122657951  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
122658461  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
122672690  serine hydroxymethyltransferase 3, chloroplastic-like isoform X1 [KO:K00600] [EC:2.1.2.1]
122660800  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
122661680  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
122654793  serine hydroxymethyltransferase 6-like isoform X1 [KO:K00600] [EC:2.1.2.1]
122656338  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
122667794  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
122669848  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
122654549  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
122639778  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
122642020  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
122645858  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
122669049  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
122659909  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
122654392  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
122667729  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
122650369  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
122651385  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
122640066  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
122664986  glycine cleavage system H protein, mitochondrial [KO:K02437]
122651563  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
122657066  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
122670931  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
122670932  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
122654140  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
122654141  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
122648929  formyltetrahydrofolate deformylase 1, mitochondrial-like [KO:K01433] [EC:3.5.1.10]
122665204  formyltetrahydrofolate deformylase 1, mitochondrial-like [KO:K01433] [EC:3.5.1.10]
122645564  formamidase-like [KO:K01455] [EC:3.5.1.49]
122649698  formamidase-like [KO:K01455] [EC:3.5.1.49]
122650182  formamidase-like [KO:K01455] [EC:3.5.1.49]
122650183  formamidase-like [KO:K01455] [EC:3.5.1.49]
122664187  formamidase-like isoform X1 [KO:K01455] [EC:3.5.1.49]
122664188  formamidase-like [KO:K01455] [EC:3.5.1.49]
122670261  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
122663849  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
tss00010  Glycolysis / Gluconeogenesis
tss00020  Citrate cycle (TCA cycle)
tss00030  Pentose phosphate pathway
tss00053  Ascorbate and aldarate metabolism
tss00071  Fatty acid degradation
tss00230  Purine metabolism
tss00250  Alanine, aspartate and glutamate metabolism
tss00260  Glycine, serine and threonine metabolism
tss00620  Pyruvate metabolism
tss00710  Carbon fixation by Calvin cycle
tss00750  Vitamin B6 metabolism
tss00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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