KEGG   PATHWAY: tua00630
Entry
tua00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Triticum urartu (red wild einkorn wheat)
Class
Metabolism; Carbohydrate metabolism
Pathway map
tua00630  Glyoxylate and dicarboxylate metabolism
tua00630

Module
tua_M00012  Glyoxylate cycle [PATH:tua00630]
tua_M00532  Photorespiration [PATH:tua00630]
tua_M00621  Glycine cleavage system [PATH:tua00630]
Other DBs
GO: 0046487 0043648
Organism
Triticum urartu (red wild einkorn wheat) [GN:tua]
Gene
125536811  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
125529917  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
125515440  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
125537987  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
125551919  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
125551920  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
125538786  malate synthase [KO:K01638] [EC:2.3.3.9]
125531389  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
125506937  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
125525771  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
125530156  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
125530273  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
125520151  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
125544281  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
125544286  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
125510774  citrate synthase 3, peroxisomal-like [KO:K01647] [EC:2.3.3.1]
125517598  citrate synthase 4, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
125530875  putative aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
125531209  putative aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
125521472  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
125543650  putative aconitate hydratase, cytoplasmic isoform X1 [KO:K01681] [EC:4.2.1.3]
125507025  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
125527965  acetyl-CoA acetyltransferase, cytosolic 1-like isoform X1 [KO:K00626] [EC:2.3.1.9]
125509777  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
125510868  glycolate oxidase 1 [KO:K11517] [EC:1.1.3.15]
125536297  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
125537363  glycolate oxidase 5 [KO:K11517] [EC:1.1.3.15]
125539758  glycolate oxidase 3 [KO:K11517] [EC:1.1.3.15]
125512263  catalase isozyme 2 [KO:K03781] [EC:1.11.1.6]
125519588  catalase isozyme 1 isoform X1 [KO:K03781] [EC:1.11.1.6]
125519720  catalase isozyme 1 isoform X1 [KO:K03781] [EC:1.11.1.6]
125519731  catalase isozyme 1 isoform X1 [KO:K03781] [EC:1.11.1.6]
125535109  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
125540693  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
125522524  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
125530540  glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
125516309  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
125515797  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
125509051  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
125538817  phosphoglycolate phosphatase 1A, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
125525273  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
125530842  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
125532415  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
16792922  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
125542917  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
125543018  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
125544104  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
125535358  ribulose bisphosphate carboxylase small subunit, chloroplastic 1-like [KO:K01602] [EC:4.1.1.39]
125535359  ribulose bisphosphate carboxylase small subunit, chloroplastic 2-like [KO:K01602] [EC:4.1.1.39]
125535360  ribulose bisphosphate carboxylase small subunit, chloroplastic 2-like [KO:K01602] [EC:4.1.1.39]
125535361  ribulose bisphosphate carboxylase small subunit, chloroplastic 2-like [KO:K01602] [EC:4.1.1.39]
125535362  ribulose bisphosphate carboxylase small subunit, chloroplastic 1 [KO:K01602] [EC:4.1.1.39]
125535364  ribulose bisphosphate carboxylase small subunit, chloroplastic 2 [KO:K01602] [EC:4.1.1.39]
125508945  ribulose bisphosphate carboxylase small subunit, chloroplastic 3 [KO:K01602] [EC:4.1.1.39]
125508947  ribulose bisphosphate carboxylase small subunit, chloroplastic 3 [KO:K01602] [EC:4.1.1.39]
125524698  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
125537550  glutamate--glyoxylate aminotransferase 2 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
125531228  glutamine synthetase cytosolic isozyme 1-3-like [KO:K01915] [EC:6.3.1.2]
125514541  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
125552456  glutamine synthetase cytosolic isozyme 1-2 [KO:K01915] [EC:6.3.1.2]
125540064  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
125513798  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
125550567  serine hydroxymethyltransferase 1, mitochondrial [KO:K00600] [EC:2.1.2.1]
125540044  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
125544399  glycine dehydrogenase (decarboxylating) 1, mitochondrial-like [KO:K00281] [EC:1.4.4.2]
125539759  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
125546125  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
125550834  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
125551018  leghemoglobin reductase-like [KO:K00382] [EC:1.8.1.4]
125551083  leghemoglobin reductase-like [KO:K00382] [EC:1.8.1.4]
125514664  glycine cleavage system H protein, mitochondrial isoform X1 [KO:K02437]
125514825  glycine cleavage system H protein, mitochondrial isoform X1 [KO:K02437]
125551094  uncharacterized protein LOC125551094 [KO:K02437]
125517488  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
125544537  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
125514309  formate dehydrogenase 2, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
125521209  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
125527016  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
125527017  formyltetrahydrofolate deformylase 2, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
125544873  formamidase-like [KO:K01455] [EC:3.5.1.49]
125547848  formamidase-like [KO:K01455] [EC:3.5.1.49]
125512884  formamidase-like [KO:K01455] [EC:3.5.1.49]
125516986  formamidase-like [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
tua00010  Glycolysis / Gluconeogenesis
tua00020  Citrate cycle (TCA cycle)
tua00030  Pentose phosphate pathway
tua00053  Ascorbate and aldarate metabolism
tua00071  Fatty acid degradation
tua00230  Purine metabolism
tua00250  Alanine, aspartate and glutamate metabolism
tua00260  Glycine, serine and threonine metabolism
tua00620  Pyruvate metabolism
tua00710  Carbon fixation by Calvin cycle
tua00750  Vitamin B6 metabolism
tua00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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