KEGG   PATHWAY: vpd00190
Entry
vpd00190                    Pathway                                
Name
Oxidative phosphorylation - Variovorax paradoxus B4
Class
Metabolism; Energy metabolism
Pathway map
vpd00190  Oxidative phosphorylation
vpd00190

Module
vpd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:vpd00190]
vpd_M00149  Succinate dehydrogenase, prokaryotes [PATH:vpd00190]
vpd_M00150  Fumarate reductase, prokaryotes [PATH:vpd00190]
vpd_M00151  Cytochrome bc1 complex respiratory unit [PATH:vpd00190]
vpd_M00153  Cytochrome bd ubiquinol oxidase [PATH:vpd00190]
vpd_M00155  Cytochrome c oxidase, prokaryotes [PATH:vpd00190]
vpd_M00156  Cytochrome c oxidase, cbb3-type [PATH:vpd00190]
vpd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vpd00190]
vpd_M00417  Cytochrome o ubiquinol oxidase [PATH:vpd00190]
Organism
Variovorax paradoxus B4 [GN:vpd]
Gene
VAPA_1c36180  nuoA; NADH-quinone oxidoreductase, subunit A NuoA [KO:K00330] [EC:7.1.1.2]
VAPA_1c36170  nuoB; NADH-quinone oxidoreductase, subunit B NuoB [KO:K00331] [EC:7.1.1.2]
VAPA_1c36160  nuoC; NADH-quinone oxidoreductase, subunit C NuoC [KO:K00332] [EC:7.1.1.2]
VAPA_1c36150  nuoD; NADH-quinone oxidoreductase, subunit D NuoD [KO:K00333] [EC:7.1.1.2]
VAPA_1c36140  nuoE; NADH-quinone oxidoreductase, subunit E NuoE [KO:K00334] [EC:7.1.1.2]
VAPA_1c36130  nuoF; NADH-quinone oxidoreductase, subunit F NuoF [KO:K00335] [EC:7.1.1.2]
VAPA_1c36120  nuoG; NADH-quinone oxidoreductase, subunit G NuoG [KO:K00336] [EC:7.1.1.2]
VAPA_1c36110  nuoH; NADH-quinone oxidoreductase, subunit H NuoH [KO:K00337] [EC:7.1.1.2]
VAPA_1c36100  nuoI; NADH-quinone oxidoreductase, subunit I NuoI [KO:K00338] [EC:7.1.1.2]
VAPA_1c36090  putative NADH-quinone oxidoreductase, subunit J [KO:K00339] [EC:7.1.1.2]
VAPA_1c36080  nuoK; NADH-quinone oxidoreductase, subunit K NuoK [KO:K00340] [EC:7.1.1.2]
VAPA_1c36070  nuoL; NADH-quinone oxidoreductase, subunit L NuoL [KO:K00341] [EC:7.1.1.2]
VAPA_1c36060  nuoM; NADH-quinone oxidoreductase, subunit M NuoM [KO:K00342] [EC:7.1.1.2]
VAPA_1c36050  nuoN; NADH-quinone oxidoreductase, subunit N NuoN [KO:K00343] [EC:7.1.1.2]
VAPA_1c37790  putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase [KO:K03885] [EC:1.6.5.9]
VAPA_1c15210  sdhA; succinate dehydrogenase, flavoprotein subunit SdhA [KO:K00239] [EC:1.3.5.1]
VAPA_1c15200  sdhB; succinate dehydrogenase, iron-sulfur subunit SdhB [KO:K00240] [EC:1.3.5.1]
VAPA_1c15230  putative succinate dehydrogenase, cytochrome b556 subunit [KO:K00241]
VAPA_1c15220  succinate dehydrogenase, hydrophobic membrane anchor protein [KO:K00242]
VAPA_2c02820  frdA; fumarate reductase, flavoprotein subunit [KO:K00244] [EC:1.3.5.1]
VAPA_2c02790  frdB; fumarate reductase, iron-sulfur subunit [KO:K00245] [EC:1.3.5.1]
VAPA_2c02800  putative succinate dehydrogenase/fumarate reductase, transmembrane subunit [KO:K00246]
VAPA_2c02810  putative succinate dehydrogenase/fumarate reductase, cytochrome b subunit [KO:K00247]
VAPA_1c12590  petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA [KO:K00411] [EC:7.1.1.8]
VAPA_1c12600  petB; cytochrome b PetB [KO:K00412]
VAPA_1c12610  putative cytochrome c1 PetC [KO:K00413]
VAPA_1c45550  ctaB; protoheme IX farnesyltransferase CtaB [KO:K02257] [EC:2.5.1.141]
VAPA_1c41960  putative cytochrome o ubiquinol oxidase, subunit IV [KO:K02300]
VAPA_1c53170  putative cytochrome c oxidase, subunit 4 [KO:K02277] [EC:7.1.1.9]
VAPA_1c53180  putative cytochrome c oxidase, subunit 3 [KO:K02276] [EC:7.1.1.9]
VAPA_1c53190  putative cytochrome c oxidase, subunit 3 [KO:K02276] [EC:7.1.1.9]
VAPA_1c45600  ctaE; cytochrome c oxidase, subunit 3 [KO:K02276] [EC:7.1.1.9]
VAPA_1c53200  cytochrome c oxidase, subunit 1 [KO:K02274] [EC:7.1.1.9]
VAPA_1c45640  ctaD; cytochrome c oxidase, subunit 1 [KO:K02274] [EC:7.1.1.9]
VAPA_1c53210  cytochrome c oxidase, subunit 2 [KO:K02275] [EC:7.1.1.9]
VAPA_1c45650  ctaC; cytochrome c oxidase, subunit 2 [KO:K02275] [EC:7.1.1.9]
VAPA_1c45620  ctaG; putative cytochrome c oxidase assembly protein CtaG [KO:K02258]
VAPA_1c45560  putative cytochrome oxidase assembly protein [KO:K02259] [EC:1.17.99.9]
VAPA_1c27350  cytochrome c oxidase, cbb3-type, subunit I [KO:K00404] [EC:7.1.1.9]
VAPA_1c27340  putative cytochrome c oxidase, cbb3-type, subunit CcoO [KO:K00405]
VAPA_1c27330  putative cytochrome c oxidase, cbb3-type, subunit CcoQ [KO:K00407]
VAPA_1c27320  putative cytochrome c oxidase, cbb3-type, subunit III [KO:K00406]
VAPA_1c41950  cyoC; cytochrome o ubiquinol oxidase, subunit III [KO:K02299]
VAPA_1c41940  cyoB; cytochrome o ubiquinol oxidase, subunit I [KO:K02298] [EC:7.1.1.3]
VAPA_1c41930  cyoA; cytochrome o ubiniquinol oxidase, subunit II [KO:K02297] [EC:7.1.1.3]
VAPA_1c34620  cydA; cytochrome d ubiquinol oxidase, subunit 1 [KO:K00425] [EC:7.1.1.7]
VAPA_1c34610  cydB; cytochrome d ubiquinol oxidase, subunit 2 [KO:K00426] [EC:7.1.1.7]
VAPA_1c34600  ybgT; putative cyd operon protein YbgT [KO:K00424] [EC:7.1.1.7]
VAPA_1c30250  putative cytochrome c, class I [KO:K08738]
VAPA_2c07660  cytochrome c domain-containing protein [KO:K08738]
VAPA_2c08690  putative cytochrome c [KO:K08738]
VAPA_1c40080  cytochrome c domain-containing protein [KO:K08738]
VAPA_1c50550  atpA; ATP synthase, subunit alpha [KO:K02111] [EC:7.1.2.2 7.2.2.1]
VAPA_1c50530  atpD; ATP synthase, subunit beta [KO:K02112] [EC:7.1.2.2 7.2.2.1]
VAPA_1c50540  atpG; ATP synthase, subunit gamma [KO:K02115]
VAPA_1c50560  atpH; ATP synthase, subunit delta [KO:K02113]
VAPA_1c50520  atpC; ATP synthase, subunit epsilon [KO:K02114]
VAPA_1c50590  atpB; ATP synthase, subunit a [KO:K02108]
VAPA_1c50570  atpF; ATP synthase, subunit b [KO:K02109]
VAPA_1c04450  putative ATP synthase, subunit c [KO:K02110]
VAPA_1c50580  atpE; ATP synthase, subunit c [KO:K02110]
VAPA_1c24970  ppa; inorganic pyrophosphatase Ppa [KO:K01507] [EC:3.6.1.1]
VAPA_1c24460  ppk1; polyphosphate kinase Ppk [KO:K00937] [EC:2.7.4.1]
VAPA_1c41660  putative polyphosphate kinase 2 [KO:K22468] [EC:2.7.4.34]
Compound
C00001  H2O
C00002  ATP
C00003  NAD+
C00004  NADH
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00013  Diphosphate
C00042  Succinate
C00080  H+
C00122  Fumarate
C00536  Triphosphate
Reference
PMID:16469879
  Authors
Sazanov LA, Hinchliffe P.
  Title
Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.
  Journal
Science 311:1430-6 (2006)
DOI:10.1126/science.1123809
Reference
PMID:16584177
  Authors
Hinchliffe P, Carroll J, Sazanov LA.
  Title
Identification of a novel subunit of respiratory complex I from Thermus thermophilus.
  Journal
Biochemistry 45:4413-20 (2006)
DOI:10.1021/bi0600998
KO pathway
ko00190   
LinkDB

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