KEGG   PATHWAY: xcb00630
Entry
xcb00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Xanthomonas campestris pv. campestris 8004
Class
Metabolism; Carbohydrate metabolism
Pathway map
xcb00630  Glyoxylate and dicarboxylate metabolism
xcb00630

Module
xcb_M00012  Glyoxylate cycle [PATH:xcb00630]
xcb_M00621  Glycine cleavage system [PATH:xcb00630]
Other DBs
GO: 0046487 0043648
Organism
Xanthomonas campestris pv. campestris 8004 [GN:xcb]
Gene
XC_0248  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
XC_4149  acetyl coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
XC_0247  malate synthase [KO:K01638] [EC:2.3.3.9]
XC_3307  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
XC_0944  citrate synthase [KO:K01647] [EC:2.3.3.1]
XC_2329  aconitase [KO:K01681] [EC:4.2.1.3]
XC_2326  aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
XC_2943  acetoacetyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
XC_0204  acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
XC_1821  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
XC_0809  acetoacetyl-coA reductase [KO:K00023] [EC:1.1.1.36]
XC_3139  catalase [KO:K03781] [EC:1.11.1.6]
XC_4037  catalase precursor [KO:K03781] [EC:1.11.1.6]
XC_3993  catalase [KO:K03781] [EC:1.11.1.6]
XC_1568  2-hydroxyacid dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
XC_0581  VirP protein [KO:K01091] [EC:3.1.3.18]
XC_3649  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
XC_0977  indigoidine synthesis like protein [KO:K01091] [EC:3.1.3.18]
XC_1768  glutamine synthase [KO:K01915] [EC:6.3.1.2]
XC_1770  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XC_0194  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XC_3544  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
XC_3135  glycine decarboxylase [KO:K00281] [EC:1.4.4.2]
XC_1232  glycine cleavage T protein [KO:K00605] [EC:2.1.2.10]
XC_2751  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XC_3689  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XC_1233  glycine cleavage H protein [KO:K02437]
XC_4315  glycerate kinase [KO:K00865] [EC:2.7.1.165]
XC_1973  KDPG and KHG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
XC_1452  formate dehydrogenase related protein [KO:K00123] [EC:1.17.1.9]
XC_0322  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
XC_2656  formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
xcb00010  Glycolysis / Gluconeogenesis
xcb00020  Citrate cycle (TCA cycle)
xcb00030  Pentose phosphate pathway
xcb00053  Ascorbate and aldarate metabolism
xcb00071  Fatty acid degradation
xcb00230  Purine metabolism
xcb00250  Alanine, aspartate and glutamate metabolism
xcb00260  Glycine, serine and threonine metabolism
xcb00620  Pyruvate metabolism
xcb00710  Carbon fixation by Calvin cycle
xcb00750  Vitamin B6 metabolism
xcb00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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