KEGG   PATHWAY: xve00630
Entry
xve00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Xanthomonas vesicatoria
Class
Metabolism; Carbohydrate metabolism
Pathway map
xve00630  Glyoxylate and dicarboxylate metabolism
xve00630

Module
xve_M00012  Glyoxylate cycle [PATH:xve00630]
xve_M00621  Glycine cleavage system [PATH:xve00630]
Other DBs
GO: 0046487 0043648
Organism
Xanthomonas vesicatoria [GN:xve]
Gene
BJD12_13880  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BJD12_11590  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BJD12_13875  malate synthase A [KO:K01638] [EC:2.3.3.9]
BJD12_17980  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BJD12_07600  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
BJD12_00825  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
BJD12_00840  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
BJD12_20125  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BJD12_13635  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BJD12_03055  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
BJD12_08430  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
BJD12_19345  catalase HPII [KO:K03781] [EC:1.11.1.6]
BJD12_10665  catalase [KO:K03781] [EC:1.11.1.6]
BJD12_10870  catalase [KO:K03781] [EC:1.11.1.6]
BJD12_04475  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BJD12_15490  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
BJD12_08990  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BJD12_07385  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
BJD12_03345  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BJD12_03355  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BJD12_13590  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
BJD12_16690  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BJD12_19360  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
BJD12_06150  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
BJD12_21010  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BJD12_09185  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BJD12_06145  glycine cleavage system protein H [KO:K02437]
BJD12_12435  glycerate kinase [KO:K00865] [EC:2.7.1.165]
BJD12_02250  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BJD12_14255  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BJD12_21520  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
xve00010  Glycolysis / Gluconeogenesis
xve00020  Citrate cycle (TCA cycle)
xve00030  Pentose phosphate pathway
xve00053  Ascorbate and aldarate metabolism
xve00071  Fatty acid degradation
xve00230  Purine metabolism
xve00250  Alanine, aspartate and glutamate metabolism
xve00260  Glycine, serine and threonine metabolism
xve00620  Pyruvate metabolism
xve00710  Carbon fixation by Calvin cycle
xve00750  Vitamin B6 metabolism
xve00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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