KEGG   PATHWAY: pcad00512
Entry
pcad00512                   Pathway                                
Name
Mucin type O-glycan biosynthesis - Physeter macrocephalus (sperm whale)
Description
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
pcad00512  Mucin type O-glycan biosynthesis
pcad00512

Module
pcad_M00056  O-glycan biosynthesis, mucin type core [PATH:pcad00512]
Other DBs
GO: 0006493
Organism
Physeter macrocephalus (sperm whale) [GN:pcad]
Gene
102973283  GALNT13; polypeptide N-acetylgalactosaminyltransferase 13 [KO:K00710] [EC:2.4.1.41]
102974490  GCNT3; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 [KO:K09662] [EC:2.4.1.-]
102974631  GALNT6; polypeptide N-acetylgalactosaminyltransferase 6 [KO:K00710] [EC:2.4.1.41]
102975797  C1GALT1C1; C1GALT1-specific chaperone 1 isoform X2 [KO:K09653]
102977665  B3GNT6; LOW QUALITY PROTEIN: acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase [KO:K00739] [EC:2.4.1.147]
102978632  GALNT8; LOW QUALITY PROTEIN: probable polypeptide N-acetylgalactosaminyltransferase 8 [KO:K00710] [EC:2.4.1.41]
102979731  GALNT12; polypeptide N-acetylgalactosaminyltransferase 12 isoform X2 [KO:K00710] [EC:2.4.1.41]
102980535  GALNTL5; inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 [KO:K00710] [EC:2.4.1.41]
102980952  ST6GALNAC3; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1 [KO:K03373] [EC:2.4.3.7]
102981107  GALNT14; polypeptide N-acetylgalactosaminyltransferase 14 [KO:K00710] [EC:2.4.1.41]
102983102  GALNT1; polypeptide N-acetylgalactosaminyltransferase 1 [KO:K00710] [EC:2.4.1.41]
102983183  ST6GALNAC2; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 isoform X2 [KO:K06616] [EC:2.4.3.3]
102983236  C1GALT1; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1 [KO:K00731] [EC:2.4.1.122]
102983655  GALNT10; polypeptide N-acetylgalactosaminyltransferase 10 isoform X2 [KO:K00710] [EC:2.4.1.41]
102983948  B4GALT5; beta-1,4-galactosyltransferase 5 [KO:K09905] [EC:2.4.1.274 2.4.1.-]
102985384  GALNT15; polypeptide N-acetylgalactosaminyltransferase 15 isoform X2 [KO:K00710] [EC:2.4.1.41]
102985413  GALNT2; polypeptide N-acetylgalactosaminyltransferase 2 [KO:K00710] [EC:2.4.1.41]
102985655  GALNT18; polypeptide N-acetylgalactosaminyltransferase 18 [KO:K00710] [EC:2.4.1.41]
102987103  GALNT3; polypeptide N-acetylgalactosaminyltransferase 3 isoform X1 [KO:K00710] [EC:2.4.1.41]
102987290  ST3GAL1; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1 [KO:K00780] [EC:2.4.3.2 2.4.3.4]
102988052  [KO:K09905] [EC:2.4.1.274 2.4.1.-]
102988240  GCNT4; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1 [KO:K09663] [EC:2.4.1.-]
102989078  GALNT9; polypeptide N-acetylgalactosaminyltransferase 9 isoform X6 [KO:K00710] [EC:2.4.1.41]
102989344  ST3GAL2; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 isoform X1 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
102989486  B3GNT3; LOW QUALITY PROTEIN: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
102990409  GALNT7; N-acetylgalactosaminyltransferase 7 isoform X1 [KO:K00710] [EC:2.4.1.41]
102990591  ST6GALNAC4; alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1 [KO:K03374] [EC:2.4.3.7]
102990672  GALNTL6; polypeptide N-acetylgalactosaminyltransferase-like 6 [KO:K00710] [EC:2.4.1.41]
102990786  GALNT5; polypeptide N-acetylgalactosaminyltransferase 5 [KO:K00710] [EC:2.4.1.41]
102990889  GALNT17; polypeptide N-acetylgalactosaminyltransferase 17 [KO:K00710] [EC:2.4.1.41]
102991336  GALNT4; polypeptide N-acetylgalactosaminyltransferase 4 [KO:K00710] [EC:2.4.1.41]
102992059  GALNT11; polypeptide N-acetylgalactosaminyltransferase 11 isoform X2 [KO:K00710] [EC:2.4.1.41]
102993381  [KO:K03373] [EC:2.4.3.7]
102993993  GALNT16; polypeptide N-acetylgalactosaminyltransferase 16 [KO:K00710] [EC:2.4.1.41]
102994842  GCNT1; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase isoform X1 [KO:K00727] [EC:2.4.1.102]
Compound
C02189  [Protein]-L-serine
G00023  Tn antigen
G00024  T antigen
G00025  
G00026  
G00027  
G00028  
G00029  
G00030  
G00031  
G00032  
G00033  
G00034  
G00035  Sialyl-Tn antigen
G10611  UDP-N-acetyl-D-galactosamine
G10794  
G13153  
Reference
  Authors
Brockhausen I.
  Title
Pathways of O-glycan biosynthesis in cancer cells.
  Journal
Biochim Biophys Acta 1473:67-95 (1999)
DOI:10.1016/S0304-4165(99)00170-1
Reference
  Authors
Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H.
  Title
Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.
  Journal
J Biol Chem 277:12802-9 (2002)
DOI:10.1074/jbc.M112457200
Reference
  Authors
Korekane H, Taguchi T, Sakamoto Y, Honke K, Dohmae N, Salminen H, Toivonen S, Helin J, Takio K, Renkonen O, Taniguchi N.
  Title
Purification and cDNA cloning of UDP-GlcNAc:GlcNAcbeta1-3Galbeta1-4Glc(NAc)-R [GlcNAc to Gal]beta1,6N-acetylglucosaminyltransferase from rat small intestine: a major carrier of dIGnT activity in rat small intestine.
  Journal
Glycobiology 13:387-400 (2003)
DOI:10.1093/glycob/cwg044
Reference
  Authors
van Die I, van Tetering A, Schiphorst WE, Sato T, Furukawa K, van den Eijnden DH.
  Title
The acceptor substrate specificity of human beta4-galactosyltransferase V indicates its potential function in O-glycosylation.
  Journal
FEBS Lett 450:52-6 (1999)
DOI:10.1016/S0014-5793(99)00462-7
Reference
  Authors
Marcos NT, Pinho S, Grandela C, Cruz A, Samyn-Petit B, Harduin-Lepers A, Almeida R, Silva F, Morais V, Costa J, Kihlberg J, Clausen H, Reis CA
  Title
Role of the human ST6GalNAc-I and ST6GalNAc-II in the synthesis of the cancer-associated sialyl-Tn antigen.
  Journal
Cancer Res 64:7050-7 (2004)
DOI:10.1158/0008-5472.CAN-04-1921
Reference
  Authors
Lee YC, Kaufmann M, Kitazume-Kawaguchi S, Kono M, Takashima S, Kurosawa N, Liu H, Pircher H, Tsuji S
  Title
Molecular cloning and functional expression of two members of mouse NeuAcalpha2,3Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc  III and IV.
  Journal
J Biol Chem 274:11958-67 (1999)
DOI:10.1074/jbc.274.17.11958
Reference
  Authors
Kudelka MR, Ju T, Heimburg-Molinaro J, Cummings RD
  Title
Simple sugars to complex disease--mucin-type O-glycans in cancer.
  Journal
Adv Cancer Res 126:53-135 (2015)
DOI:10.1016/bs.acr.2014.11.002
Reference
  Authors
Yeh JC, Hiraoka N, Petryniak B, Nakayama J, Ellies LG, Rabuka D, Hindsgaul O, Marth JD, Lowe JB, Fukuda M
  Title
Novel sulfated lymphocyte homing receptors and their control by a Core1 extension beta 1,3-N-acetylglucosaminyltransferase.
  Journal
Cell 105:957-69 (2001)
DOI:10.1016/S0092-8674(01)00394-4
Related
pathway
pcad00533  Glycosaminoglycan biosynthesis - keratan sulfate
KO pathway
ko00512   

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