KEGG   PATHWAY: pre00920
Entry
pre00920                    Pathway                                
Name
Sulfur metabolism - Metapseudomonas resinovorans
Description
Sulfur is an essential element for life and the metabolism of organic sulfur compounds plays an important role in the global sulfur cycle. Sulfur occurs in various oxidation states ranging from +6 in sulfate to -2 in sulfide (H2S). Sulfate reduction can occur in both an energy consuming assimilatory pathway and an energy producing dissimilatory pathway. The assimilatory pathway, which is found in a wide range of organisms, produces reduced sulfur compounds for the biosynthesis of S-containing amino acids and does not lead to direct excretion of sulfide. In the dissimilatory pathway, which is restricted to obligatory anaerobic bacterial and archaeal lineages, sulfate (or sulfur) is the terminal electron acceptor of the respiratory chain producing large quantities of inorganic sulfide. Both pathways start from the activation of sulfate by reaction with ATP to form adenylyl sulfate (APS). In the assimilatory pathway [MD:M00176] APS is converted to 3'-phosphoadenylyl sulfate (PAPS) and then reduced to sulfite, and sulfite is further reduced to sulfide by the assimilatory sulfite reductase. In the dissimilatory pathway [MD:M00596] APS is directly reduced to sulfite, and sulfite is further reduced to sulfide by the dissimilatory sulfite reductase. The capacity for oxidation of sulfur is quite widespread among bacteria and archaea, comprising phototrophs and chemolithoautotrophs. The SOX (sulfur-oxidation) system [MD:M00595] is a well-known sulfur oxidation pathway and is found in both photosynthetic and non-photosynthetic sulfur-oxidizing bacteria. Green sulfur bacteria and purple sulfur bacteria carry out anoxygenic photosynthesis with reduced sulfur compounds such as sulfide and elemental sulfur, as well as thiosulfate (in some species with the SOX system), as the electron donor for photoautotrophic growth. In some chemolithoautotrophic sulfur oxidizers (such as Thiobacillus denitrificans), it has been suggested that dissimilatory sulfur reduction enzymes operate in the reverse direction, forming a sulfur oxidation pathway from sulfite to APS and then to sulfate.
Class
Metabolism; Energy metabolism
Pathway map
pre00920  Sulfur metabolism
pre00920

Module
pre_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pre00920]
pre_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pre00920]
Other DBs
GO: 0006790
Organism
Metapseudomonas resinovorans [GN:pre]
Gene
PCA10_01400  cysA; sulfate ABC transporter ATP-binding protein [KO:K02045] [EC:7.3.2.3]
PCA10_01410  cysW; sulfate ABC transporter permease protein CysW [KO:K02047]
PCA10_01420  cysT; sulfate ABC transporter permease protein CysT [KO:K02046]
PCA10_01430  cysP; sulfate ABC transporter substrate-binding protein CysP [KO:K23163]
PCA10_01780  [KO:K15553]
PCA10_01790  [KO:K15554]
PCA10_01800  [KO:K15555] [EC:7.6.2.14]
PCA10_02010  mdeA; methionine gamma-lyase [KO:K01739] [EC:2.5.1.48]
PCA10_02050  [KO:K15553]
PCA10_02060  [KO:K15554]
PCA10_02070  [KO:K15555] [EC:7.6.2.14]
PCA10_02110  tauD; taurine dioxygenase [KO:K03119] [EC:1.14.11.17]
PCA10_02120  tauC; taurine ABC transporter permease protein [KO:K15552]
PCA10_02130  tauB; taurine ABC transporter ATP-binding protein [KO:K10831] [EC:7.6.2.7]
PCA10_02140  tauA; taurine ABC transporter substrate-binding protein [KO:K15551]
PCA10_02160  [KO:K15553]
PCA10_02190  ssuA; aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553]
PCA10_02200  ssuD; alkanesulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PCA10_02210  ssuC; aliphatic sulfonate ABC transporter permease protein [KO:K15554]
PCA10_02220  ssuB; aliphatic sulfonate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
PCA10_02840  metX; homoserine O-acetyltransferase [KO:K00641] [EC:2.3.1.31 2.3.1.46]
PCA10_04790  [KO:K20035] [EC:1.3.99.41]
PCA10_04810  [KO:K20035] [EC:1.3.99.41]
PCA10_04820  acdA; acyl-CoA dehydrogenase AcdA [KO:K20035] [EC:1.3.99.41]
PCA10_05360  glpE; thiosulfate sulfurtransferase GlpE [KO:K02439] [EC:2.8.1.1]
PCA10_08910  cysI; NADPH--sulfite reductase hemoprotein beta-component [KO:K00381] [EC:1.8.1.2]
PCA10_09840  [KO:K00380] [EC:1.8.1.2]
PCA10_10480  cysD; sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
PCA10_10490  cysNC; sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
PCA10_11320  cysE; serine acetyltransferase [KO:K00640] [EC:2.3.1.30]
PCA10_13530  [KO:K02439] [EC:2.8.1.1]
PCA10_15450  acdA; acyl-CoA dehydrogenase AcdA [KO:K20035] [EC:1.3.99.41]
PCA10_15480  [KO:K20034] [EC:6.2.1.44]
PCA10_16920  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
PCA10_18380  [KO:K01011] [EC:2.8.1.1 2.8.1.2]
PCA10_18630  cysK; cysteine synthase A [KO:K01738] [EC:2.5.1.47]
PCA10_20200  metZ; O-succinylhomoserine sulfhydrylase [KO:K10764] [EC:2.5.1.-]
PCA10_21890  [KO:K21310] [EC:2.1.1.334]
PCA10_24480  cysE; serine acetyltransferase [KO:K00640] [EC:2.3.1.30]
PCA10_27090  [KO:K19713] [EC:1.8.2.2]
PCA10_29590  acdA; acyl-CoA dehydrogenase AcdA [KO:K20035] [EC:1.3.99.41]
PCA10_30010  [KO:K15553]
PCA10_30020  ssuD; alkanesulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PCA10_30030  [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PCA10_30070  ssuD; alkanesulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PCA10_30110  msuE; NADH-dependent FMN reductase MsuE [KO:K00299] [EC:1.5.1.38]
PCA10_30170  ssuC; aliphatic sulfonate ABC transporter permease protein [KO:K15554]
PCA10_30180  ssuC; aliphatic sulfonate ABC transporter permease protein [KO:K15554]
PCA10_30190  [KO:K15555] [EC:7.6.2.14]
PCA10_31360  [KO:K17226]
PCA10_32880  cysH; phosphoadenosine phosphosulfate reductase [KO:K00390] [EC:1.8.4.8 1.8.4.10]
PCA10_36540  cysI; NADPH--sulfite reductase hemoprotein beta-component [KO:K00381] [EC:1.8.1.2]
PCA10_39530  sbp; sulfate ABC transporter substrate-binding protein [KO:K02048]
PCA10_40600  msuE; NADH-dependent FMN reductase MsuE [KO:K00299] [EC:1.5.1.38]
PCA10_40610  ssuD; alkanesulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PCA10_40720  [KO:K17228] [EC:1.14.14.35]
PCA10_40900  [KO:K00380] [EC:1.8.1.2]
PCA10_46010  [KO:K01738] [EC:2.5.1.47]
PCA10_51940  rhdA; thiosulfate sulfurtransferase RhdA [KO:K01011] [EC:2.8.1.1 2.8.1.2]
PCA10_53940  cysQ; 3'(2'),5'-bisphosphate nucleotidase [KO:K01082] [EC:3.1.3.7]
PCA10_54070  [KO:K20035] [EC:1.3.99.41]
Compound
C00033  Acetate
C00042  Succinate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00065  L-Serine
C00073  L-Methionine
C00084  Acetaldehyde
C00087  Sulfur
C00094  Sulfite
C00097  L-Cysteine
C00155  L-Homocysteine
C00224  Adenylyl sulfate
C00245  Taurine
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00320  Thiosulfate
C00409  Methanethiol
C00511  Acrylic acid
C00580  Dimethyl sulfide
C00894  Propenoyl-CoA
C00979  O-Acetyl-L-serine
C01013  3-Hydroxypropanoate
C01118  O-Succinyl-L-homoserine
C01180  4-Methylthio-2-oxobutanoic acid
C01861  Trithionate
C02084  Tetrathionate
C03172  S-Methyl-L-methionine
C03920  2-(Methylthio)ethanesulfonate
C04022  S,S-Dimethyl-beta-propiothetin
C08276  3-(Methylthio)propanoate
C11142  Dimethyl sulfone
C11143  Dimethyl sulfoxide
C11145  Methanesulfonic acid
C15521  Alkanesulfonate
C17267  S-Sulfanylglutathione
C19692  Polysulfide
C20870  3-(Methylthio)propanoyl-CoA
C20955  3-(Methylthio)acryloyl-CoA
C22315  (2R)-2-Hydroxy-4-(methylsulfanyl)butanoate
C22316  (2R)-4-(Dimethylsulfaniumyl)-2-hydroxybutanoate
C22834  Protein-trisulfide
C23001  3-Aminopropyl(dimethyl)sulfanium
C23002  3-Dimethylsulfoniopropionaldehyde
Reference
  Authors
Grein F, Ramos AR, Venceslau SS, Pereira IA
  Title
Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism.
  Journal
Biochim Biophys Acta 1827:145-60 (2013)
DOI:10.1016/j.bbabio.2012.09.001
Reference
  Authors
Fauque GD, Barton LL
  Title
Hemoproteins in dissimilatory sulfate- and sulfur-reducing prokaryotes.
  Journal
Adv Microb Physiol 60:1-90 (2012)
DOI:10.1016/B978-0-12-398264-3.00001-2
Reference
  Authors
Sakurai H, Ogawa T, Shiga M, Inoue K
  Title
Inorganic sulfur oxidizing system in green sulfur bacteria.
  Journal
Photosynth Res 104:163-76 (2010)
DOI:10.1007/s11120-010-9531-2
Reference
  Authors
Falkenby LG, Szymanska M, Holkenbrink C, Habicht KS, Andersen JS, Miller M, Frigaard NU
  Title
Quantitative proteomics of Chlorobaculum tepidum: insights into the sulfur metabolism of a phototrophic green sulfur bacterium.
  Journal
FEMS Microbiol Lett 323:142-50 (2011)
DOI:10.1111/j.1574-6968.2011.02370.x
Reference
  Authors
Gregersen LH, Bryant DA, Frigaard NU
  Title
Mechanisms and evolution of oxidative sulfur metabolism in green sulfur bacteria.
  Journal
Front Microbiol 2:116 (2011)
DOI:10.3389/fmicb.2011.00116
Reference
  Authors
Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP.
  Title
The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans.
  Journal
J Bacteriol 188:1473-88 (2006)
DOI:10.1128/JB.188.4.1473-1488.2006
Reference
PMID:9695921
  Authors
Pott AS, Dahl C
  Title
Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur.
  Journal
Microbiology 144 ( Pt 7):1881-94 (1998)
DOI:10.1099/00221287-144-7-1881
Reference
  Authors
Frigaard NU, Dahl C
  Title
Sulfur metabolism in phototrophic sulfur bacteria.
  Journal
Adv Microb Physiol 54:103-200 (2009)
DOI:10.1016/S0065-2911(08)00002-7
Related
pathway
pre00260  Glycine, serine and threonine metabolism
pre00270  Cysteine and methionine metabolism
pre00640  Propanoate metabolism
pre00680  Methane metabolism
pre00720  Other carbon fixation pathways
KO pathway
ko00920   

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