KEGG   PATHWAY: sscv00512
Entry
sscv00512                   Pathway                                
Name
Mucin type O-glycan biosynthesis - Syngnathus scovelli (Gulf pipefish)
Description
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
sscv00512  Mucin type O-glycan biosynthesis
sscv00512

Other DBs
GO: 0006493
Organism
Syngnathus scovelli (Gulf pipefish) [GN:sscv]
Gene
125967653  polypeptide N-acetylgalactosaminyltransferase 2 isoform X1 [KO:K00710] [EC:2.4.1.41]
125967202  polypeptide N-acetylgalactosaminyltransferase 18 [KO:K00710] [EC:2.4.1.41]
125989183  polypeptide N-acetylgalactosaminyltransferase 6 [KO:K00710] [EC:2.4.1.41]
125975386  polypeptide N-acetylgalactosaminyltransferase 1 [KO:K00710] [EC:2.4.1.41]
125990420  polypeptide N-acetylgalactosaminyltransferase 14 [KO:K00710] [EC:2.4.1.41]
125976865  probable polypeptide N-acetylgalactosaminyltransferase 8 [KO:K00710] [EC:2.4.1.41]
125971132  polypeptide N-acetylgalactosaminyltransferase 18a isoform X1 [KO:K00710] [EC:2.4.1.41]
125986037  polypeptide N-acetylgalactosaminyltransferase 11 [KO:K00710] [EC:2.4.1.41]
125986996  polypeptide N-acetylgalactosaminyltransferase 15-like [KO:K00710] [EC:2.4.1.41]
125972885  polypeptide N-acetylgalactosaminyltransferase 17-like [KO:K00710] [EC:2.4.1.41]
125972886  polypeptide N-acetylgalactosaminyltransferase 17 isoform X1 [KO:K00710] [EC:2.4.1.41]
125987413  polypeptide N-acetylgalactosaminyltransferase 4 isoform X1 [KO:K00710] [EC:2.4.1.41]
125987420  polypeptide N-acetylgalactosaminyltransferase 12 [KO:K00710] [EC:2.4.1.41]
125973550  polypeptide N-acetylgalactosaminyltransferase 5 [KO:K00710] [EC:2.4.1.41]
125973554  polypeptide N-acetylgalactosaminyltransferase 3 isoform X1 [KO:K00710] [EC:2.4.1.41]
125973559  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1 [KO:K00710] [EC:2.4.1.41]
125981010  polypeptide N-acetylgalactosaminyltransferase 16 [KO:K00710] [EC:2.4.1.41]
125994605  polypeptide N-acetylgalactosaminyltransferase 9 isoform X1 [KO:K00710] [EC:2.4.1.41]
125981966  polypeptide N-acetylgalactosaminyltransferase 10-like isoform X1 [KO:K00710] [EC:2.4.1.41]
125981970  polypeptide N-acetylgalactosaminyltransferase 10 isoform X1 [KO:K00710] [EC:2.4.1.41]
125976681  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B [KO:K00731] [EC:2.4.1.122]
125986655  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1 [KO:K00731] [EC:2.4.1.122]
125988176  C1GALT1-specific chaperone 1 [KO:K09653]
125970194  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 [KO:K09662] [EC:2.4.1.-]
125965717  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1 [KO:K09663] [EC:2.4.1.-]
125986794  CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like [KO:K00780] [EC:2.4.3.2 2.4.3.4]
125970632  CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
125990878  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like isoform X1 [KO:K03479] [EC:2.4.3.3]
125990879  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like [KO:K03479] [EC:2.4.3.3]
125990880  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like isoform X1 [KO:K03479] [EC:2.4.3.3]
125991114  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [KO:K06616] [EC:2.4.3.3]
125984705  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1 [KO:K03373] [EC:2.4.3.7]
125979775  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1 [KO:K03374] [EC:2.4.3.7]
125966005  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like isoform X1 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
125987783  beta-1,4-galactosyltransferase 5 [KO:K09905] [EC:2.4.1.274 2.4.1.-]
Compound
C02189  [Protein]-L-serine
G00023  Tn antigen
G00024  Thomsen-Friedenreich antigen
G00025   
G00026  Sialyl T antigen
G00027   
G00028   
G00029   
G00030   
G00031   
G00032   
G00033   
G00034   
G00035  Sialyl-Tn antigen
G10611  UDP-N-acetyl-D-galactosamine
G10794   
G13153   
Reference
  Authors
Brockhausen I.
  Title
Pathways of O-glycan biosynthesis in cancer cells.
  Journal
Biochim Biophys Acta 1473:67-95 (1999)
DOI:10.1016/S0304-4165(99)00170-1
Reference
  Authors
Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H.
  Title
Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.
  Journal
J Biol Chem 277:12802-9 (2002)
DOI:10.1074/jbc.M112457200
Reference
  Authors
Korekane H, Taguchi T, Sakamoto Y, Honke K, Dohmae N, Salminen H, Toivonen S, Helin J, Takio K, Renkonen O, Taniguchi N.
  Title
Purification and cDNA cloning of UDP-GlcNAc:GlcNAcbeta1-3Galbeta1-4Glc(NAc)-R [GlcNAc to Gal]beta1,6N-acetylglucosaminyltransferase from rat small intestine: a major carrier of dIGnT activity in rat small intestine.
  Journal
Glycobiology 13:387-400 (2003)
DOI:10.1093/glycob/cwg044
Reference
  Authors
van Die I, van Tetering A, Schiphorst WE, Sato T, Furukawa K, van den Eijnden DH.
  Title
The acceptor substrate specificity of human beta4-galactosyltransferase V indicates its potential function in O-glycosylation.
  Journal
FEBS Lett 450:52-6 (1999)
DOI:10.1016/S0014-5793(99)00462-7
Reference
  Authors
Marcos NT, Pinho S, Grandela C, Cruz A, Samyn-Petit B, Harduin-Lepers A, Almeida R, Silva F, Morais V, Costa J, Kihlberg J, Clausen H, Reis CA
  Title
Role of the human ST6GalNAc-I and ST6GalNAc-II in the synthesis of the cancer-associated sialyl-Tn antigen.
  Journal
Cancer Res 64:7050-7 (2004)
DOI:10.1158/0008-5472.CAN-04-1921
Reference
  Authors
Lee YC, Kaufmann M, Kitazume-Kawaguchi S, Kono M, Takashima S, Kurosawa N, Liu H, Pircher H, Tsuji S
  Title
Molecular cloning and functional expression of two members of mouse NeuAcalpha2,3Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc  III and IV.
  Journal
J Biol Chem 274:11958-67 (1999)
DOI:10.1074/jbc.274.17.11958
Reference
  Authors
Kudelka MR, Ju T, Heimburg-Molinaro J, Cummings RD
  Title
Simple sugars to complex disease--mucin-type O-glycans in cancer.
  Journal
Adv Cancer Res 126:53-135 (2015)
DOI:10.1016/bs.acr.2014.11.002
Reference
  Authors
Yeh JC, Hiraoka N, Petryniak B, Nakayama J, Ellies LG, Rabuka D, Hindsgaul O, Marth JD, Lowe JB, Fukuda M
  Title
Novel sulfated lymphocyte homing receptors and their control by a Core1 extension beta 1,3-N-acetylglucosaminyltransferase.
  Journal
Cell 105:957-69 (2001)
DOI:10.1016/S0092-8674(01)00394-4
Related
pathway
sscv00533  Glycosaminoglycan biosynthesis - keratan sulfate
KO pathway
ko00512   
LinkDB

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