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09100 Metabolism
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ome03000]
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03021 Transcription machinery [BR:ome03021]
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03019 Messenger RNA biogenesis [BR:ome03019]
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03041 Spliceosome
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03011 Ribosome [BR:ome03011]
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03009 Ribosome biogenesis [BR:ome03009]
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OLMES_1246 ribonuclease III
OLMES_1824 oligoribonuclease
OLMES_1247 GTP-binding protein Era
OLMES_0817 GTPase ObgE
OLMES_4596 DnaK suppressor protein
OLMES_1499 transcription elongation factor NusA
OLMES_0807 transcription antitermination protein NusB
OLMES_0674 transcription antitermination protein NusG
OLMES_2638 ribosomal small subunit pseudouridine synthase
OLMES_4522 rsmA; SAM-dependent 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase
OLMES_0033 rsmB; SAM-dependent 16S rRNA m(5)C967 methyltransferase
OLMES_2990 rsmC; SAM-dependent 16S rRNA m(2)G1207 methyltransferase
OLMES_0342 rsmD; SAM-dependent 16S rRNA m(2)G966 methyltransferase
OLMES_1708 rsmE; SAM-dependent 16S rRNA m(3)U1498 methyltransferase
OLMES_5627 rsmG; SAM-dependent 16S rRNA m(7)G527 methyltransferase
OLMES_4705 rsmH; SAM-dependent 16S rRNA m(4)C1402 methyltransferase
OLMES_4708 rsmI; SAM-dependent 16S rRNA C1402 2'-O-ribose methyltransferase
OLMES_4416 rsmJ; SAM-dependent 16S rRNA m(2)G1516 methyltransferase
OLMES_3521 rlmA; SAM-dependent 23S rRNA m(1)G745 methyltransferase
OLMES_1077 rlmB; SAM-dependent 23S rRNA mG2251 2'-O-ribose methyltransferase
OLMES_1491 rlmE; SAM-dependent 23S rRNA U2552 2'-O-ribose methyltransferase
OLMES_2336 rlmF; SAM-dependent 23S rRNA m(6)A1618 methyltransferase
OLMES_0408 rlmG; SAM-dependent 23S rRNA m(2)G1835 methyltransferase
OLMES_4136 rlmH; SAM-dependent 23S rRNA m(3)Psi1915 pseudouridine methyltransferase
OLMES_4553 SAM-dependent methyltransferase
OLMES_2276 SAM-dependent methyltransferase-like protein
OLMES_0770 rlmI; SAM-dependent 23S rRNA m(5)C1962 methyltransferase
OLMES_3849 rlmJ; SAM-dependent 23S rRNA m(6)A2030 methyltransferase
OLMES_3460 rlmL; SAM-dependent fused 23S rRNA m(2)G2445 and m(7)G2069 methyltransferase
OLMES_2484 rlmN; SAM-dependent dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase
OLMES_1252 rlmD; SAM-dependent 23S rRNA m(5)U1939 methyltransferase
OLMES_2993 pseudouridine synthase Rlu family protein
OLMES_4774 pseudouridine synthase
OLMES_3426 ribosomal large subunit pseudouridine synthase B
OLMES_2216 ribosomal large subunit pseudouridine synthase C
OLMES_0838 23S RNA-specific pseudouridylate synthase
OLMES_2058 ribosomal large subunit pseudouridine synthase A
OLMES_4722 acetyltransferase
OLMES_3375 ribosomal protein S6 modification protein
OLMES_5132 ribosomal protein S6 modification glutaminyl transferase
OLMES_1220 16S rRNA-processing protein RimM
OLMES_1874 ribosomal protein S12 methylthiotransferase
OLMES_0977 ribosomal protein L11 methyltransferase
OLMES_3286 ribosomal protein L3-specific protein-(glutamine-N5) methyltransferase
OLMES_3253 cupin
OLMES_2214 ribonuclease
OLMES_1883 ribonuclease G
OLMES_0321 Holliday junction resolvase YqgF
OLMES_1675 ATP-dependent RNA helicase DbpA
OLMES_2826 DEAD/DEAH box helicase-like protein
OLMES_0024 ribosomal interacting GTPase
OLMES_1823 rsgA; ribosome small subunit-dependent GTPase A
OLMES_2491 GTP-binding protein EngA
OLMES_1112 GTP-binding protein, HSR1-related
OLMES_1834 hflX; GTPase HflX
OLMES_0038 tsaC; threonine-dependent ADP-forming ATPase of tRNA(ANN) t(6)A37 threonylcarbamoyladenosine biosynthesis complex
OLMES_1363 (p)ppGpp synthetase I
OLMES_1501 ribosome-binding factor A
OLMES_1498 ribosome maturation factor rimP
OLMES_4140 hypothetical protein
OLMES_1865 metal-dependent hydrolase
OLMES_1490 RNA-binding protein
OLMES_1886 hypothetical protein
OLMES_0102 ribosome modulation factor-related protein
OLMES_3461 ribosome modulation factor
OLMES_1891 ribosome-associated protein
OLMES_1177 GTP-dependent nucleic acid-binding protein EngD
OLMES_2220 metal-binding protein
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K03685 rnc; ribonuclease III [EC:3.1.26.3]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K02860 rimM; 16S rRNA processing protein RimM
K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K14540 rbgA; ribosome biogenesis GTPase A
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K09889 yjgA; ribosome-associated protein
K03812 rmf; ribosome modulation factor
K03812 rmf; ribosome modulation factor
K05808 hpf; ribosome hibernation promoting factor
K06942 ychF; ribosome-binding ATPase
K07040 yceD; DUF177 domain-containing protein
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03016 Transfer RNA biogenesis [BR:ome03016]
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03012 Translation factors [BR:ome03012]
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03110 Chaperones and folding catalysts [BR:ome03110]
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04131 Membrane trafficking [BR:ome04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:ome03051]
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03032 DNA replication proteins [BR:ome03032]
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03036 Chromosome and associated proteins [BR:ome03036]
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03400 DNA repair and recombination proteins [BR:ome03400]
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03029 Mitochondrial biogenesis [BR:ome03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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