Specified Pathogens by Law in Japan Specified Pathogens by Law in Japan| Pathogens | Infectious disease | |||||
| Class | Name | KEGG | Name | KEGG | Category | |
| Class I Pathogens | Mammarenavirus | Guanarito virus (Guanarito mammarenavirus) | T40007 | South American hemorrhagic fever | H00385 | 1 |
| Sabia virus (Brazilian mammarenavirus) | T40008 | |||||
| Chapare virus (Chapare mammarenavirus) | T40330 | |||||
| Junin virus (Argentinian mammarenavirus) | T40005 | |||||
| Machupo virus (Machupo mammarenavirus) | T40006 | |||||
| Mammarenavirus | Lassa virus (Lassa mammarenavirus) | T40010 | Lassa fever | H00386 | 1 | |
| Orthoebolavirus | Tai Forest ebolavirus | T40125 | Ebola hemorrhagic fever | H00283 | 1 | |
| Zaire ebolavirus | T40012 | |||||
| Bundibugyo ebolavirus | T40121 | |||||
| Sudan ebolavirus | T40014 | |||||
| Reston ebolavirus | T40013 | |||||
| Orthopoxvirus | Variola virus | T40082 | Smallpox | H00372 | 1 | |
| Orthonairovirus | Crimean-Congo hemorrhagic fever virus | T40011 | Crimean-Congo hemorrhagic fever | H00284 | 1 | |
| Orthomarburgvirus | Lake Victoria marburgvirus | T40015 | Marburg disease | H00405 | 1 | |
| Class II Pathogens | Yersinia | Yersinia pestis | T00063 T00092 T00369 T00370 T00505 T00635 T01832 T01833 |
Plague | H00297 | 1 |
| Clostridium | Clostridium botulinum | T00533 T00574 T00575 T00883 T00670 T00671 T00895 T00767 T00563 T01865 T02076 |
Botulism | H00339 | 4 | |
| Betacoronavirus | SARS coronavirus | T40069 | Severe acute respiratory syndrome | H00402 | 2 | |
| Bacillus | Bacillus anthracis | T00129 T00178 T00184 T00892 T02028 T03162 T02999 |
Anthrax | H00328 | 4 | |
| Francisella | Francisella tularensis | T00214 T00495 T01938 T00399 T00584 T02349 T02350 |
Tularemia | H00312 | 4 | |
| Botulinum toxin | K06011 | Botulism | H00339 | 4 | ||
| Class III Pathogens | Alphavirus | Eastern equine encephalitis virus | T40054 | Eastern equine encephalitis | H01535 | 4 |
| Alphavirus | Western equine encephalitis virus | T40053 | Western equine encephalitis | H01534 | 4 | |
| Alphavirus | Venezuelan equine encephalitis virus | T40028 | Venezuelan equine encephalitis | H01547 | 4 | |
| Orthopoxvirus | Monkeypox virus | T40083 | Mpox (Monkeypox) | H00373 | 4 | |
| Coxiella | Coxiella burnetii | T00124 T00632 T00787 T00788 |
Q fever | H00310 | 4 | |
| Coccidioides | Coccidioides immitis | T01114 | Coccidioidomycosis | H01319 | 4 | |
| Simplexvirus | B virus | T40077 | B virus infection | H00387 | 4 | |
| Burkholderia | Burkholderia pseudomallei | T00203 T00289 T00480 T00481 T00894 T02756 T02049 T02301 |
Melioidosis | H00317 | 4 | |
| Burkholderia | Burkholderia mallei | T00204 T00479 |
Glanders | H00316 | 4 | |
| Orthohantavirus | Andes virus (Andes orthohantavirus) | T40021 | Hantavirus pulmonary syndrome | H00390 | 4 | |
| Sin Nombre virus (Sin Nombre orthohantavirus) | T40020 | |||||
| New York hantavirus | ||||||
| Bayou virus (Bayou orthohantavirus) | T40358 | |||||
| Black Creek Canal orthohantavirus | ||||||
| Laguna Negra orthohantavirus | ||||||
| Orthohantavirus | Seoul virus (Seoul orthohantavirus) | T40017 | Hemorrhagic fever with renal syndrome | H00389 | 4 | |
| Dobrava virus (Dobrava-Belgrade orthohantavirus) | T40018 | |||||
| Hantaan virus (Hantaan orthohantavirus) | T40016 | |||||
| Puumala virus (Puumala orthohantavirus) | T40019 | |||||
| Bandavirus | SFTS virus | T40096 | Severe fever with thrombocytopenia syndrome | H01416 | 4 | |
| Phlebovirus | Rift Valley fever virus | T40030 | Rift Valley fever | H01549 | 4 | |
| Orthoflavivirus | Omsk hemorrhagic fever virus | T40058 | Omsk hemorrhagic fever | H00416 | 4 | |
| Orthoflavivirus | Kyasanur Forest disease virus | T40328 | Kyasanur Forest disease | H01322 | 4 | |
| Orthoflavivirus | Tick-borne encephalitis virus | T40061 | Tick-borne viral encephalitis | H00380 | 4 | |
| Brucella | Brucella abortus | T00241 | Brucellosis | H00325 | 4 | |
| Brucella canis | ||||||
| Brucella suis | T00096 | |||||
| Brucella melitensis | T00072 T00867 T01852 T00304 |
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| Henipavirus | Nipah virus (Nipah henipavirus) | T40047 | Nipah virus infection | H01539 | 4 | |
| Henipavirus | Hendra virus (Hendra henipavirus) | T40046 | Hendra virus infection | H01538 | 4 | |
| Betacoronavirus | MERS coronavirus | T40090 | Middle East respiratory syndrome | H01419 | 2 | |
| Mycobacterium | Mycobacterium tuberculosis | T01992 T00940 T02141 |
Multidrug-resistant tuberculosis | H01472 | 2 | |
| Rickettsia | Rickettsia japonica | T01637 | Japanese spotted fever | H00323 | 4 | |
| Rickettsia | Rickettsia prowazekii | T00018 T01977 T02543 T02544 |
Epidemic typhus | H00322 | 4 | |
| Rickettsia | Rickettsia rickettsii | T00604 | Rocky Mountain spotted fever | H00323 | 4 | |
| Lyssavirus | Rabies virus (Rabies lyssavirus) | T40022 | Rabies | H00377 | 4 | |
| Class IV Pathogens | Alphainfluenzavirus | Influenza A virus (H2N2) | T40036 | Influenza | H00398 | 5 |
| Alphainfluenzavirus | Influenza A virus (H5N1) | T40041 | Specified avian influenza | H00399 | 2 | |
| Influenza A virus (H7N9) | T40041 | 2 | ||||
| Alphainfluenzavirus | Influenza A virus (H7N7) | T40041 | Avian influenza | H00399 | 4 | |
| Alphainfluenzavirus | Influenza A virus (new type) | T40041 | New type of influenza | H00399 | ||
| Betacoronavirus | SARS-CoV-2 | T40361 | COVID-19 | H02398 | 5 | |
| Escherichia | Escherichia coli | T00044 T00048 T00778 T00949 T02122 T01098 T01097 T01096 T02256 T02316 T02257 T03010 T03011 |
Enterohemorrhagic Escherichia coli infection | H00277 | 3 | |
| Enterovirus | Poliovirus | T40344 T40345 T40346 |
Acute poliomyelitis | H00376 | 2 | |
| Chlamydia | Chlamydia psittaci | T01481 T02097 T01862 T02311 |
Psittacosis | H00350 | 4 | |
| Cryptosporidium | Cryptosporidium parvum | T00168 | Cryptosporidiosis | H00356 | 5 | |
| Salmonella | Salmonella enterica (serovar Typhi) | T00064 T00121 T01741 |
Typhoid fever | H00111 | 3 | |
| Salmonella | Salmonella enterica (serovar Paratyphi) | T00219 T00756 |
Paratyphoid fever | H00112 | 3 | |
| Shigella | Shigella sonnei | T00274 | Shigellosis | H00299 | 3 | |
| Shigella dysenteriae | T00306 T02933 |
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| Shigella flexneri | T00097 T00128 T00377 T01883 T03751 |
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| Shigella boydii | T00301 T00700 |
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| Vibrio | Vibrio cholerae (serotype O1, O139) | T00034 T03827 T03666 T01650 T03389 T00903 T01766 T00520 T02099 T00891 |
Cholera | H00110 | 3 | |
| Orthoflavivirus | Yellow fever virus | T40057 | Yellow fever | H00384 | 4 | |
| Orthoflavivirus | West Nile virus | T40029 | West Nile fever | H01548 | 4 | |
| Orthoflavivirus | Dengue virus | T40048 | Dengue | H00381 | 4 | |
| Orthoflavivirus | Japanese encephalitis virus | T40052 | Japanese encephalitis | H01533 | 4 | |
| Mycobacterium | Mycobacterium tuberculosis | T01991 T01993 T00015 T00053 T00545 T01690 T01575 T00540 |
Tuberculosis | H00342 | 2 | |
| Shiga toxin | K11006 K11007 |
Shigellosis, EHEC, etc. | H00299 | 3 | ||