SSDB Best Search Result

Entry:spnu:SPN034183_15940 (383 a.a.)
Name:putative DNA-binding protein

Search Result : 231 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
spn:SP_1809 transcriptional regulator                              383     2449     0.995      383     
spr:spr1629 Conserved hypothetical protein                         383     2444     0.992      383     
ljo:LJ_1054 hypothetical protein                                   392      875     0.404      394     
sau:SA0142 ORFID:SA0142; hypothetical protein, similar             391      850     0.391      396     
vg:26648699 Clostridium phage phiCT9441A; transcription            388      497     0.281      392     
cdf:CD630_29270 Transcriptional regulator, Phage-type              382      480     0.287      366     
lpl:lp_2003 zinc metallopeptidase                                  375      476     0.278      356     
efa:EF3272 zinc-binding transcriptional regulator, Cro/            379      465     0.289      357     
plu:plu3469 unnamed protein product; Similar to unknown            399      429     0.271      373     
pmr:PMI1994 putative transcriptional regulator                     375      428     0.295      356     
yps:YPTB0245 conserved hypothetical protein                        400      426     0.273      362     
acb:A1S_1762 hypothetical protein                                  360      404     0.284      366     
sur:STAUR_2635 Phage-like DNA-binding protein                      401      371     0.262      336     
nme:NMB2012 transcriptional regulator, HTH_3 family                363      370     0.260      366     
kfl:Kfla_4651 protein of unknown function DUF955                   371      352     0.272      356     
swi:Swit_3472 protein of unknown function DUF955                   355      336     0.262      309     
cdi:DIP0183 Putative transcriptional regulator                     340      336     0.290      310     
bps:BPSL3115 putative transcriptional regulator                    356      331     0.296      314     
sml:Smlt1906 putative phage-related protein                        378      330     0.274      318     
eca:ECA2911 putative DNA-binding protein                           370      324     0.279      340     
rha:RHA1_ro10082 possible transcriptional regulator                378      318     0.274      310     
rsp:RSP_1622 Putative DNA-binding protein                          352      314     0.255      361     
sco:SCO3537 putative DNA-binding protein                           390      314     0.282      341     
mtu:Rv2017 transcriptional regulator                               346      303     0.272      320     
mtc:MT2073 DNA-binding protein, putative                           346      303     0.272      320     
nca:Noca_3570 protein of unknown function DUF955                   372      302     0.283      311     
bja:bll7220 ORF_ID:bll7220; hypothetical protein                   363      298     0.214      360     
cau:Caur_0676 helix-turn-helix domain protein                      422      289     0.275      316     
xau:Xaut_3976 protein of unknown function DUF955                   355      274     0.259      309     
sgr:SGR_3315 putative DNA-binding protein                          378      266     0.265      310     
amd:AMED_7323 XRE family transcriptional regulator                 369      216     0.327      153     
eba:ebA2392 putative transcriptional regulator                     389      204     0.242      388     
npu:Npun_F5445 protein of unknown function DUF955                  381      181     0.223      376     
gvi:gll0267 ORF_ID:gll0267; probable transcriptional re            366      177     0.221      312     
mab:MAB_4876c Conserved hypothetical protein                       400      175     0.303      178     
bxe:Bxe_A1805 transcriptional regulator, XRE family                396      169     0.245      392     
gox:GOX2462 Transcriptional regulator                              171      169     0.293      174     
ana:all5131 transcriptional regulator                              402      169     0.226      296     
mmu:17535 double-strand break repair protein MRE11 isof K10865     706      163     0.222      297     
nfa:NFA_9450 hypothetical protein                                  394      161     0.223      318     
dsy:DSY0845 hypothetical protein                                   187      158     0.293      150     
sme:SM_b20754 probable transcriptional regulator        K21686     491      156     0.239      285     
cge:100750877 double-strand break repair protein MRE11  K10865     705      155     0.224      295     
ocu:100356946 double-strand break repair protein MRE11  K10865     706      153     0.208      293     
ssc:100516687 LOW QUALITY PROTEIN: double-strand break  K10865     708      151     0.224      294     
mca:MCA0678 conserved hypothetical protein                         156      151     0.290      138     
pst:PSPTO_4250 DNA-binding protein                                 378      151     0.192      360     
vpa:VP1778 putative transcriptional regulator           K14056     185      151     0.265      132     
mva:Mvan_0511 protein of unknown function DUF955                   414      149     0.216      264     
tma:TM0656 conserved hypothetical protein                          176      149     0.271      133     
chy:CHY_0294 conserved hypothetical protein                        393      148     0.292      120     
cjc:100411097 double-strand break repair protein MRE11  K10865     709      147     0.218      294     
mta:Moth_1627 transcriptional regulator, XRE family                300      147     0.311      132     
mcc:697566 double-strand break repair protein MRE11 iso K10865     708      146     0.221      294     
rno:64046 double-strand break repair protein MRE11      K10865     706      146     0.214      294     
oas:101114806 double-strand break repair protein MRE11  K10865     707      145     0.221      294     
ccyc:SCMU_22910 hypothetical protein                               162      144     0.287      136     
hsa:4361 double-strand break repair protein MRE11 isofo K10865     708      144     0.221      294     
scl:sce1282 unnamed protein product; Hypothetical prote            412      144     0.325      126     
ptr:737902 double-strand break repair protein MRE11 iso K10865     708      144     0.221      294     
xla:394308 double-strand break repair protein MRE11     K10865     711      144     0.215      297     
xtr:100135381 double-strand break repair protein MRE11A K10865     709      143     0.219      297     
bta:525093 double-strand break repair protein MRE11     K10865     708      143     0.221      294     
bha:BH2909 BH2909; unknown conserved protein                       189      143     0.250      184     
fca:101086923 double-strand break repair protein MRE11  K10865     709      142     0.212      293     
bfr:BF3687 putative transcriptional regulator                      245      142     0.301      113     
rfq:117031213 double-strand break repair protein MRE11  K10865     709      141     0.222      297     
mar:MAE_50260 hypothetical protein                                 395      141     0.218      312     
cfa:494006 double-strand break repair protein MRE11 iso K10865     708      141     0.208      293     
ral:Rumal_3898 protein of unknown function DUF955                  165      140     0.294      136     
mdm:103422622 putative disease resistance RPP13-like pr           1406      136     0.299      144     
apl:APL_0950 hypothetical protein                                  187      136     0.267      172     
ecb:100060936 double-strand break repair protein MRE11  K10865     708      133     0.226      287     
aga:1272464 hexamerin-1.1-like                                     689      133     0.197      290     
xac:XAC1494 phage-related protein                                  275      133     0.315      124     
bth:BT_2783 transcriptional regulator                              191      132     0.256      180     
lla:L10283 transcriptional regulator                               185      132     0.367      60      
gpo:GPOL_c17010 putative transcriptional regulator, XRE K21686     471      131     0.250      284     
llm:llmg_0006 Putative HTH-type transcriptional regulat            185      131     0.367      60      
reh:H16_B1998 transcriptional regulator, XRE-family                199      131     0.263      133     
gsu:GSU2540 helix-turn-helix transcriptional regulator             181      131     0.261      157     
mdo:100014068 MRE11 homolog, double strand break repair K10865     707      130     0.220      295     
gme:Gmet_0901 helix-turn-helix transcriptional regulato            181      130     0.379      58      
sro:Sros_6481 putative transcriptional regulator, XRE f            291      129     0.420      50      
bvu:BVU_2720 transcriptional regulator                             191      128     0.281      135     
aci:ACIAD0874 conserved hypothetical protein; putative             410      128     0.284      229     
smu:SMU_218 putative transcriptional regulator                     117      128     0.377      61      
cpy:Cphy_0065 transcriptional regulator, XRE family                273      127     0.362      58      
sen:SACE_4145 HTH transcriptional regulator, XRE family            196      127     0.330      91      
cth:Cthe_0751 Cupin 2 conserved barrel domain protein              179      127     0.202      183     
elm:ELI_0858 hypothetical protein                                  148      126     0.282      110     
ttm:Tthe_1668 transcriptional regulator, XRE family     K01356     268      126     0.323      65      
sshi:J5U23_03197 putative HTH-type transcriptional regu K03627     164      124     0.314      70      
bpf:BpOF4_02250 putative transcriptional regulator XRE             188      124     0.247      158     
gtn:GTNG_0320 Conserved hypothetical protein                       260      124     0.361      61      
ppu:PP_2884 XRE family transcriptional regulator                   181      124     0.346      81      
sso:SSO0270 Multiprotein Bridging Factor (MBP-like), pu K03627     165      124     0.324      71      
hin:HI_0582 glucose inhibited division protein (gidA)   K03495     629      124     0.235      162     
cpoc:100721147 double-strand break repair protein MRE11 K10865     712      123     0.222      293     
sno:Snov_2114 transcriptional regulator, XRE family                206      123     0.288      146     
neu:NE2538 conserved hypothetical protein                          303      123     0.333      87      
cst:CLOST_1478 Transcriptional regulator, XRE family               179      122     0.359      64      
mea:Mex_2p0467 conserved hypothetical protein                      299      122     0.256      164     
cbo:CBO0732 putative phage related protein                         202      121     0.328      125     
yen:YE0024 oxygen-independent coproporphyrinogen III ox K02495     457      121     0.210      305     
msm:MSMEG_0906 DNA-binding protein                      K07110     478      121     0.202      282     
rle:RL2181 conserved hypothetical protein                          303      121     0.283      145     
sot:107062923 receptor-like protein 12                             854      120     0.203      379     
osa:4334778 uncharacterized protein isoform X1                     651      120     0.256      219     
psb:Psyr_0238 Helix-turn-helix motif protein                       199      120     0.278      79      
sto:STK_03310 putative Xre family DNA-binding protein   K03627     165      120     0.349      63      
cte:CT2253 conserved hypothetical protein                          386      120     0.240      254     
bsu:BSU04810 metallopeptidase ImmA                                 169      120     0.349      83      
rcu:8269968 tetratricopeptide repeat protein SKI3 isofo K12600    1180      119     0.283      191     
mmi:MMAR_0024 plasmid maintenance system antidote prote K18831     358      119     0.369      84      
ppp:112288408 uncharacterized protein isoform X1                   882      119     0.256      223     
reu:Reut_A0583 Protein of unknown function UPF0079      K06925     176      119     0.311      90      
mmp:MMP1057 hypothetical protein                                   353      119     0.277      184     
rpa:TX73_021395 helix-turn-helix transcriptional regula            116      119     0.289      97      
rcp:RCAP_rcc00902 transcriptional regulator, XRE family K21686     465      118     0.197      330     
lba:Lebu_0404 transcriptional regulator, XRE family                108      118     0.325      80      
cps:CPS_4679 putative transcriptional regulator                    180      118     0.329      79      
ban:BA_3373 DNA-binding protein                                    374      118     0.213      225     
vvu:VV1_0393 Ribosomal protein L22                                 180      118     0.252      159     
tte:TTE0674 hypothetical protein                                   282      117     0.227      273     
spy:SPy_1834 hypothetical protein                                  195      117     0.212      165     
cac:CA_C0841 Predicted transcriptional regulator                   179      117     0.260      131     
amj:102564966 RAN binding protein 17                    K24115     895      116     0.225      276     
phe:Phep_2086 helix-turn-helix domain protein                      327      116     0.328      64      
avn:Avin_37310 conserved hypothetical protein                      302      116     0.290      107     
ncr:NCU11312 CorA family metal ion transporter          K16073     630      116     0.241      166     
mgr:MGG_08314 C6 transcription factor                              894      116     0.219      265     
mul:MUL_4534 transcriptional regulatory protein         K07110     474      116     0.232      284     
nar:Saro_2203 protein of unknown function DUF955                   282      116     0.309      110     
rru:Rru_A2316 transcriptional regulator, XRE family     K21686     474      116     0.220      341     
cgl:Cgl0698 Predicted transcriptional regulators        K21686     441      116     0.219      270     
xfa:XF_0496 conserved hypothetical protein                         391      116     0.222      203     
pam:PANA_2464 PuuR                                      K14056     185      115     0.316      79      
pjd:Pjdr2_2045 beta-lactamase domain protein                       230      115     0.250      236     
bmf:BAB1_0270 zinc-dependent metallopeptidase                      182      115     0.354      82      
syf:Synpcc7942_2038 transcriptional regulator, XRE fami            230      115     0.278      133     
syc:syc2056_d transcription regulator                              230      115     0.278      133     
cpe:CPE1967 conserved hypothetical protein                         179      115     0.242      132     
sfl:SF1304 DNA-binding transcriptional repressor PuuR   K14056     185      114     0.259      108     
pae:PA5301 transcriptional regulator                               182      114     0.260      173     
ecs:ECs_1876 putrescine inducible repressor for the div K14056     185      114     0.259      108     
eco:b1299 DNA-binding transcriptional repressor PuuR    K14056     185      114     0.259      108     
rer:RER_35240 malto-oligosyltrehalose trehalohydrolase  K01236     573      113     0.242      265     
lcb:LCABL_30800 Prophage Lp3 protein 2                             212      113     0.255      153     
csa:Csal_2087 transcriptional regulator, XRE family wit            195      113     0.344      64      
ser:SERP0685 transcriptional regulator, Cro/CI family              179      113     0.328      61      
btk:BT9727_4938 transcriptional regulator, DNA-binding  K07729      63      113     0.345      58      
son:SO_1265 putrescine degradation gene regulator PuuR             182      113     0.291      79      
ssy:SLG_24750 putative Xre family transcriptional regul K21686     471      112     0.231      108     
enc:ECL_B069 type IV conjugative transfer system protei            676      112     0.258      163     
zma:100280734 cell division cycle protein 23            K03355     599      112     0.212      222     
blo:BL0450 ATP binding protein of ABC transporter       K02003     265      112     0.242      186     
pfl:PFL_6035 HTH-type transcriptional regulator PuuR               182      112     0.291      79      
sil:SPO1583 DNA-binding protein, putative                          217      112     0.344      64      
cro:ROD_03581 transcriptional regulator of the polyamin K14056     185      111     0.259      108     
pde:Pden_4472 protein of unknown function DUF955        K21686     464      111     0.217      276     
cje:Cj1306c hypothetical protein                                   408      111     0.281      178     
bme:BMEI1683 zinc-dependent metallopeptidase                       182      111     0.354      82      
sly:101246451 nuclear/nucleolar GTPase 2-like                      132      110     0.250      100     
gmx:121174844 uncharacterized protein LOC121174844                 573      110     0.271      192     
ksk:KSE_30250 putative transcriptional regulator                   112      110     0.333      72      
aag:5564193 zinc metalloproteinase-disintegrin-like EoM            860      110     0.206      194     
kpn:KPN_01019 putative oxidoreductase/putative regulato K14056     185      110     0.259      108     
oih:OB2854 hypothetical conserved protein                          179      110     0.247      81      
pti:PHATRDRAFT_24408 n-acetyl transferase               K00670     198      109     0.297      111     
cja:CJA_1207 Domain of unknown function (DUF955) family            280      109     0.333      63      
nve:5500519 glutathione S-transferase theta-1           K00799     230      109     0.186      231     
ath:AT3G45310 Cysteine proteinases superfamily protein  K01366     358      109     0.234      205     
vch:VC_1968 transcriptional regulator, HTH_3 family     K23779     181      109     0.260      181     
dne:112995150 methyltransferase-like protein 24                    289      108     0.245      192     
smar:SM39_1696 putative transcriptional regulator       K23779     187      108     0.240      150     
mse:Msed_0404 hypothetical protein                                 244      108     0.200      210     
xom:XOO0441 hypothetical protein                                   279      108     0.333      87      
sao:SAOUHSC_00357 hypothetical protein                              87      108     0.323      65      
vfi:VF_A0931 transcriptional regulatory protein, AraC-l            261      108     0.243      239     
rco:RC0668 unknown                                                 125      108     0.313      67      
nta:107791864 uncharacterized protein LOC107791864                 320      107     0.208      259     
esa:ESA_02080 hypothetical protein                      K14056     185      107     0.250      108     
gga:416080 A disintegrin and metalloproteinase with thr K08624    1929      107     0.205      229     
bce:BC5256 Transcriptional regulator, PBSX family       K07729      63      107     0.328      58      
ret:RHE_PE00434 putative transcriptional regulator prot            134      106     0.300      60      
dde:Dde_2318 Cupin 2 conserved barrel domain protein               188      106     0.274      113     
rpr:RP497 unknown                                                  130      106     0.313      67      
tru:101074892 N-terminal Xaa-Pro-Lys N-methyltransferas K19579     292      105     0.222      261     
pif:PITG_11387 hypothetical protein                                296      105     0.285      144     
hel:HELO_2982 PuuR family transcription regulator PuuR             200      105     0.338      65      
tva:4773730 phosphatidylinositol-3,4,5-trisphosphate 3- K01110     317      105     0.226      235     
sma:SAVERM_219 hypothetical protein                                298      105     0.252      111     
spo:3361383 hydroxymethylbilane synthase                K01749     336      105     0.244      172     
atu:Atu3328 aldehyde dehydrogenase-like protein                    182      105     0.321      81      
afu:AF_0694 replication control protein A, putative                190      104     0.229      153     
gla:GL50803_0023888 putative FixW protein                          211      103     0.243      144     
stp:Strop_1170 helix-turn-helix domain protein                     196      103     0.309      81      
bms:BRA0415 transcriptional regulator, LuxR family                 255      103     0.212      226     
syn:slr6057 hypothetical protein                                   195      103     0.318      88      
sty:HCM1.253 putative DNA-repair modulator              K03502     419      103     0.237      97      
tde:TDE_2752 conserved hypothetical protein                         90      102     0.340      53      
ecj:JW1430 predicted DNA-binding transcriptional regula K23779     178      102     0.288      66      
vvi:100244107 thiol protease aleurain-like isoform X1   K01366     362      101     0.225      231     
det:DET0548 DNA-binding protein                         K07729      67      101     0.308      52      
ola:101166618 alpha N-terminal protein methyltransferas K19579     293      100     0.254      197     
rso:RSp0962 putative transcription regulator protein               182      100     0.362      58      
lin:pli0006 pli0006                                                111      100     0.286      63      
ccr:CC_2251 transcriptional regulator, Cro/CI family               131      100     0.245      94      
sct:SCAT_2813 conserved protein of unknown function     K27097     148       99     0.277      94      
cin:100185975 cyclin-J                                             314       99     0.254      201     
xcc:XCC3971 transcriptional regulator                   K07729      66       99     0.346      52      
ava:Ava_1494 transcriptional regulator, XRE family                  96       98     0.341      44      
ngo:NGO_1013 XRE family transcriptional regulator                  126       97     0.298      57      
cel:CELE_C26B9.6 RING-type domain-containing protein    K15700     306       97     0.191      204     
lmo:lmo0416 transcriptional regulator                   K07729      67       97     0.279      61      
maj:MAA_02458 hypothetical protein                                 203       96     0.253      158     
ddd:Dda3937_01754 MunI regulatory protein                           76       96     0.357      56      
tko:TK1339 predicted transcription regulator, containin K07729      65       96     0.327      52      
dre:137496231 uncharacterized protein                              244       96     0.254      118     
ypk:y0699 hypothetical                                             103       96     0.308      52      
ype:YPO3485 putative transcriptional regulatory protein            103       96     0.308      52      
pab:PAB7155 Helix-turn-helix repressor protein family   K07729      73       96     0.328      61      
mja:MJ_0272 repressor protein, putative (yorfE)         K07729      79       96     0.290      62      
dra:DR_2454 transcriptional regulator, PbsX family      K07729      64       96     0.288      59      
mma:MM_0927 transcriptional regulator, PBSX family      K07729      67       94     0.295      61      
ase:ACPL_2874 putative HTH-type transcriptional regulat K07729      73       93     0.303      66      
mba:Mbar_A0692 transcriptional regulator, XRE family    K07729      74       91     0.281      64      
stm:STM1605 putative oxidoreductase                     K23779     178       91     0.294      68      
mth:MTH_1328 conserved protein                          K07729      69       88     0.270      63      
ddi:DDB_G0293616 hypothetical protein                               73       84     0.242      66      

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