KEGG   DISEASE: Primary immunodeficiency disease
Entry
H01725                      Disease                                
Name
Primary immunodeficiency disease
  Subgroup
Disorders of innate immunity [DS:H02525]
Disorders of adaptive immunity [DS:H02526]
Other well-defined immunodeficiency syndromes [DS:H00107]
Description
Primary immunodeficiency diseases (PIDs) are genetically determined disorders of the immune system resulting in greatly enhanced susceptibility to infectious disease, autoimmunity and malignancy. Many are associated with single gene defects, whereas others may be polygenic or may represent interactions of genetically determined characteristics with environmental or infectious stresses. There are more than 150 different disorders which have been described till date. PIDs are broadly classified as disorders of adaptive immunity (i.e., T-cell, B-cell or combined immunodeficiencies) or of innate immunity (e.g., phagocyte and complement disorders). Early diagnosis and treatment are imperative for preventing significant disease-associated morbidity.
Category
Immune system disease
Brite
Human diseases in ICD-11 classification [BR:br08403]
 04 Diseases of the immune system
  Primary immunodeficiencies
   4A00  Primary immunodeficiencies due to disorders of innate immunity
    H01725  Primary immunodeficiency disease
   4A01  Primary immunodeficiencies due to disorders of adaptive immunity
    H01725  Primary immunodeficiency disease
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06526  MAPK signaling
   H01725  Primary immunodeficiency disease
  nt06518  JAK-STAT signaling
   H01725  Primary immunodeficiency disease
  nt06516  TNF signaling
   H01725  Primary immunodeficiency disease
 Cellular process
  nt06527  Necroptosis
   H01725  Primary immunodeficiency disease
 Immune system
  nt06521  NLR signaling
   H01725  Primary immunodeficiency disease
  nt06537  TCR/BCR signaling
   H01725  Primary immunodeficiency disease
Disease
pathway
hsa05340  Primary immunodeficiency
Network
nt06516 TNF signaling
nt06518 JAK-STAT signaling
nt06521 NLR signaling
nt06526 MAPK signaling
nt06527 Necroptosis
nt06537 TCR/BCR signaling
Gene
(IMD14A/14B) PIK3CD [HSA:5293] [KO:K00922]
(IMD69) IFNG [HSA:3458] [KO:K04687]
(IMD73A/73B/73C) RAC2 [HSA:5880] [KO:K07860]
(IMD75) TET2 [HSA:54790] [KO:K24309]
(IMD94) IL6ST [HSA:3572] [KO:K05060]
(IMD100) OAS1 [HSA:4938] [KO:K14216]
(IMD101) POLR3F [HSA:10621] [KO:K03025]
(IMD102) SASH3 [HSA:54440] [KO:K23706]
(IMD107) OTULIN [HSA:90268] [KO:K18343]
(IMD108) CEBPE [HSA:1053] [KO:K10051]
(IMD109) TNFRSF9 [HSA:3604] [KO:K05146]
(IMD111/HATIS) DPP9 [HSA:91039] [KO:K08656]
(IMD113) ARPC5 [HSA:10092] [KO:K05754]
(IMD114) SLC19A1 [HSA:6573] [KO:K14609]
(IMD118) MCTS1 [HSA:28985] [KO:K07575]
(IMD125) FLT3LG [HSA:2323] [KO:K05454]
(IMD126) PTCRA [HSA:171558] [KO:K06056]
(IMD132B) TRAF3 [HSA:7187] [KO:K03174]
Other DBs
ICD-11: 4A00 4A01
MeSH: D000081207
OMIM: 615513 619281 618963 608203 618986 618987 619126 619750 618042 619872 301082 619986 260570 620282 620331 620565 620603 301115 620926 620931 621096
Reference
  Authors
McCusker C, Warrington R
  Title
Primary immunodeficiency.
  Journal
Allergy Asthma Clin Immunol 7 Suppl 1:S11 (2011)
DOI:10.1186/1710-1492-7-S1-S11
Reference
  Authors
Madkaikar M, Mishra A, Ghosh K
  Title
Diagnostic approach to primary immunodeficiency disorders.
  Journal
Indian Pediatr 50:579-86 (2013)
DOI:10.1007/s13312-013-0171-4
Reference
PMID:24165795 (IMD14A)
  Authors
Lucas CL, Kuehn HS, Zhao F, Niemela JE, Deenick EK, Palendira U, Avery DT, Moens L, Cannons JL, Biancalana M, Stoddard J, Ouyang W, Frucht DM, Rao VK, Atkinson TP, Agharahimi A, Hussey AA, Folio LR, Olivier KN, Fleisher TA, Pittaluga S, Holland SM, Cohen JI, Oliveira JB, Tangye SG, Schwartzberg PL, Lenardo MJ, Uzel G
  Title
Dominant-activating germline mutations in the gene encoding the PI(3)K catalytic subunit p110delta result in T cell senescence and human immunodeficiency.
  Journal
Nat Immunol 15:88-97 (2014)
DOI:10.1038/ni.2771
Reference
PMID:30040974 (IMD14B)
  Authors
Sogkas G, Fedchenko M, Dhingra A, Jablonka A, Schmidt RE, Atschekzei F
  Title
Primary immunodeficiency disorder caused by phosphoinositide 3-kinase delta deficiency.
  Journal
J Allergy Clin Immunol 142:1650-1653.e2 (2018)
DOI:10.1016/j.jaci.2018.06.039
Reference
PMID:32163377 (IMD69)
  Authors
Kerner G, Rosain J, Guerin A, Al-Khabaz A, Oleaga-Quintas C, Rapaport F, Massaad MJ, Ding JY, Khan T, Ali FA, Rahman M, Deswarte C, Martinez-Barricarte R, Geha RS, Jeanne-Julien V, Garcia D, Chi CY, Yang R, Roynard M, Fleckenstein B, Rozenberg F, Boisson-Dupuis S, Ku CL, Seeleuthner Y, Beziat V, Marr N, Abel L, Al-Herz W, Casanova JL, Bustamante J
  Title
Inherited human IFN-gamma deficiency underlies mycobacterial disease.
  Journal
J Clin Invest 130:3158-3171 (2020)
DOI:10.1172/JCI135460
Reference
PMID:10758162 (IMD73A)
  Authors
Ambruso DR, Knall C, Abell AN, Panepinto J, Kurkchubasche A, Thurman G, Gonzalez-Aller C, Hiester A, deBoer M, Harbeck RJ, Oyer R, Johnson GL, Roos D
  Title
Human neutrophil immunodeficiency syndrome is associated with an inhibitory Rac2 mutation.
  Journal
Proc Natl Acad Sci U S A 97:4654-9 (2000)
DOI:10.1073/pnas.080074897
Reference
PMID:30723080 (IMD73B)
  Authors
Hsu AP, Donko A, Arrington ME, Swamydas M, Fink D, Das A, Escobedo O, Bonagura V, Szabolcs P, Steinberg HN, Bergerson J, Skoskiewicz A, Makhija M, Davis J, Foruraghi L, Palmer C, Fuleihan RL, Church JA, Bhandoola A, Lionakis MS, Campbell S, Leto TL, Kuhns DB, Holland SM
  Title
Dominant activating RAC2 mutation with lymphopenia, immunodeficiency, and cytoskeletal defects.
  Journal
Blood 133:1977-1988 (2019)
DOI:10.1182/blood-2018-11-886028
Reference
PMID:25512081 (IMD73C)
  Authors
Alkhairy OK, Rezaei N, Graham RR, Abolhassani H, Borte S, Hultenby K, Wu C, Aghamohammadi A, Williams DA, Behrens TW, Hammarstrom L, Pan-Hammarstrom Q
  Title
RAC2 loss-of-function mutation in 2 siblings with characteristics of common variable immunodeficiency.
  Journal
J Allergy Clin Immunol 135:1380-4.e1-5 (2015)
DOI:10.1016/j.jaci.2014.10.039
Reference
PMID:32518946 (IMD75)
  Authors
Stremenova Spegarova J, Lawless D, Mohamad SMB, Engelhardt KR, Doody G, Shrimpton J, Rensing-Ehl A, Ehl S, Rieux-Laucat F, Cargo C, Griffin H, Mikulasova A, Acres M, Morgan NV, Poulter JA, Sheridan EG, Chetcuti P, O'Riordan S, Anwar R, Carter CR, Przyborski S, Windebank K, Cant AJ, Lako M, Bacon CM, Savic S, Hambleton S
  Title
Germline TET2 loss of function causes childhood immunodeficiency and lymphoma.
  Journal
Blood 136:1055-1066 (2020)
DOI:10.1182/blood.2020005844
Reference
PMID:33517393 (IMD94)
  Authors
Materna-Kiryluk A, Pollak A, Gawalski K, Szczawinska-Poplonyk A, Rydzynska Z, Sosnowska A, Cukrowska B, Gasperowicz P, Konopka E, Pietrucha B, Grzywa TM, Banaszak-Ziemska M, Niedziela M, Skalska-Sadowska J, Stawinski P, Sladowski D, Nowis D, Ploski R
  Title
Mosaic IL6ST variant inducing constitutive GP130 cytokine receptor signaling as a cause of neonatal onset immunodeficiency with autoinflammation and dysmorphy.
  Journal
Hum Mol Genet 30:226-233 (2021)
DOI:10.1093/hmg/ddab035
Reference
PMID:29455859 (IMD100)
  Authors
Cho K, Yamada M, Agematsu K, Kanegane H, Miyake N, Ueki M, Akimoto T, Kobayashi N, Ikemoto S, Tanino M, Fujita A, Hayasaka I, Miyamoto S, Tanaka-Kubota M, Nakata K, Shiina M, Ogata K, Minakami H, Matsumoto N, Ariga T
  Title
Heterozygous Mutations in OAS1 Cause Infantile-Onset Pulmonary Alveolar Proteinosis with Hypogammaglobulinemia.
  Journal
Am J Hum Genet 102:480-486 (2018)
DOI:10.1016/j.ajhg.2018.01.019
Reference
PMID:30211253 (IMD101)
  Authors
Carter-Timofte ME, Hansen AF, Mardahl M, Fribourg S, Rapaport F, Zhang SY, Casanova JL, Paludan SR, Christiansen M, Larsen CS, Mogensen TH
  Title
Varicella-zoster virus CNS vasculitis and RNA polymerase III gene mutation in identical twins.
  Journal
Neurol Neuroimmunol Neuroinflamm 5:e500 (2018)
DOI:10.1212/NXI.0000000000000500
Reference
PMID:33876203 (IMD102)
  Authors
Delmonte OM, Bergerson JRE, Kawai T, Kuehn HS, McDermott DH, Cortese I, Zimmermann MT, Dobbs AK, Bosticardo M, Fink D, Majumdar S, Palterer B, Pala F, Dsouza NR, Pouzolles M, Taylor N, Calvo KR, Daley SR, Velez D, Agharahimi A, Myint-Hpu K, Dropulic LK, Lyons JJ, Holland SM, Freeman AF, Ghosh R, Similuk MB, Niemela JE, Stoddard J, Kuhns DB, Urrutia R, Rosenzweig SD, Walkiewicz MA, Murphy PM, Notarangelo LD
  Title
SASH3 variants cause a novel form of X-linked combined immunodeficiency with immune dysregulation.
  Journal
Blood 138:1019-1033 (2021)
DOI:10.1182/blood.2020008629
Reference
PMID:35587511 (IMD107)
  Authors
Spaan AN, Neehus AL, Laplantine E, Staels F, Ogishi M, Seeleuthner Y, Rapaport F, Lacey KA, Van Nieuwenhove E, Chrabieh M, Hum D, Migaud M, Izmiryan A, Lorenzo L, Kochetkov T, Heesterbeek DAC, Bardoel BW, DuMont AL, Dobbs K, Chardonnet S, Heissel S, Baslan T, Zhang P, Yang R, Bogunovic D, Wunderink HF, Haas PA, Molina H, Van Buggenhout G, Lyonnet S, Notarangelo LD, Seppanen MRJ, Weil R, Seminario G, Gomez-Tello H, Wouters C, Mesdaghi M, Shahrooei M, Bossuyt X, Sag E, Topaloglu R, Ozen S, Leavis HL, van Eijk MMJ, Bezrodnik L, Blancas Galicia L, Hovnanian A, Nassif A, Bader-Meunier B, Neven B, Meyts I, Schrijvers R, Puel A, Bustamante J, Aksentijevich I, Kastner DL, Torres VJ, Humblet-Baron S, Liston A, Abel L, Boisson B, Casanova JL
  Title
Human OTULIN haploinsufficiency impairs cell-intrinsic immunity to staphylococcal alpha-toxin.
  Journal
Science 376:eabm6380 (2022)
DOI:10.1126/science.abm6380
Reference
PMID:31201888 (IMD108)
  Authors
Goos H, Fogarty CL, Sahu B, Plagnol V, Rajamaki K, Nurmi K, Liu X, Einarsdottir E, Jouppila A, Pettersson T, Vihinen H, Krjutskov K, Saavalainen P, Jarvinen A, Muurinen M, Greco D, Scala G, Curtis J, Nordstrom D, Flaumenhaft R, Vaarala O, Kovanen PE, Keskitalo S, Ranki A, Kere J, Lehto M, Notarangelo LD, Nejentsev S, Eklund KK, Varjosalo M, Taipale J, Seppanen MRJ
  Title
Gain-of-function CEBPE mutation causes noncanonical autoinflammatory inflammasomopathy.
  Journal
J Allergy Clin Immunol 144:1364-1376 (2019)
DOI:10.1016/j.jaci.2019.06.003
Reference
PMID:30872117 (IMD109)
  Authors
Alosaimi MF, Hoenig M, Jaber F, Platt CD, Jones J, Wallace J, Debatin KM, Schulz A, Jacobsen E, Moller P, Shamseldin HE, Abdulwahab F, Ibrahim N, Alardati H, Almuhizi F, Abosoudah IF, Basha TA, Chou J, Alkuraya FS, Geha RS
  Title
Immunodeficiency and EBV-induced lymphoproliferation caused by 4-1BB deficiency.
  Journal
J Allergy Clin Immunol 144:574-583.e5 (2019)
DOI:10.1016/j.jaci.2019.03.002
Reference
PMID:36112693 (IMD111)
  Authors
Harapas CR, Robinson KS, Lay K, Wong J, Moreno Traspas R, Nabavizadeh N, Rass-Rothschild A, Boisson B, Drutman SB, Laohamonthonkul P, Bonner D, Xiong JR, Gorrell MD, Davidson S, Yu CH, Fleming MD, Gudera J, Stein J, Ben-Harosh M, Groopman E, Shimamura A, Tamary H, Kayserili H, Hatipoglu N, Casanova JL, Bernstein JA, Zhong FL, Masters SL, Reversade B
  Title
DPP9 deficiency: An inflammasomopathy that can be rescued by lowering NLRP1/IL-1 signaling.
  Journal
Sci Immunol 7:eabi4611 (2022)
DOI:10.1126/sciimmunol.abi4611
Reference
PMID:37349293 (IMD113)
  Authors
Nunes-Santos CJ, Kuehn H, Boast B, Hwang S, Kuhns DB, Stoddard J, Niemela JE, Fink DL, Pittaluga S, Abu-Asab M, Davies JS, Barr VA, Kawai T, Delmonte OM, Bosticardo M, Garofalo M, Carneiro-Sampaio M, Somech R, Gharagozlou M, Parvaneh N, Samelson LE, Fleisher TA, Puel A, Notarangelo LD, Boisson B, Casanova JL, Derfalvi B, Rosenzweig SD
  Title
Inherited ARPC5 mutations cause an actinopathy impairing cell motility and disrupting cytokine signaling.
  Journal
Nat Commun 14:3708 (2023)
DOI:10.1038/s41467-023-39272-0
Reference
PMID:36745868 (IMD114)
  Authors
Shiraishi A, Uygun V, Sharfe N, Beldar S, Sun MGF, Dadi H, Vong L, Maxson M, Karaca NE, Mevlitoglu S, Grinstein S, Artan R, Merico D, Roifman CM
  Title
Novel immunodeficiency caused by homozygous mutation in solute carrier family 19 member 1, which encodes the reduced folate carrier.
  Journal
Blood 141:3226-3230 (2023)
DOI:10.1182/blood.2022017968
Reference
PMID:37875108 (IMD118)
  Authors
Bohlen J, Zhou Q, Philippot Q, Ogishi M, Rinchai D, Nieminen T, Seyedpour S, Parvaneh N, Rezaei N, Yazdanpanah N, Momenilandi M, Conil C, Neehus AL, Schmidt C, Arango-Franco CA, Voyer TL, Khan T, Yang R, Puchan J, Erazo L, Roiuk M, Vatovec T, Janda Z, Bagaric I, Materna M, Gervais A, Li H, Rosain J, Peel JN, Seeleuthner Y, Han JE, L'Honneur AS, Moncada-Velez M, Martin-Fernandez M, Horesh ME, Kochetkov T, Schmidt M, AlShehri MA, Salo E, Saxen H, ElGhazali G, Yatim A, Soudee C, Sallusto F, Ensser A, Marr N, Zhang P, Bogunovic D, Cobat A, Shahrooei M, Beziat V, Abel L, Wang X, Boisson-Dupuis S, Teleman AA, Bustamante J, Zhang Q, Casanova JL
  Title
Human MCTS1-dependent translation of JAK2 is essential for IFN-gamma immunity to mycobacteria.
  Journal
Cell 186:5114-5134.e27 (2023)
DOI:10.1016/j.cell.2023.09.024
Reference
PMID:38701783 (IMD125)
  Authors
Momenilandi M, Levy R, Sobrino S, Li J, Lagresle-Peyrou C, Esmaeilzadeh H, Fayand A, Le Floc'h C, Guerin A, Della Mina E, Shearer D, Delmonte OM, Yatim A, Mulder K, Mancini M, Rinchai D, Denis A, Neehus AL, Balogh K, Brendle S, Rokni-Zadeh H, Changi-Ashtiani M, Seeleuthner Y, Deswarte C, Bessot B, Cremades C, Materna M, Cederholm A, Ogishi M, Philippot Q, Beganovic O, Ackermann M, Wuyts M, Khan T, Fouere S, Herms F, Chanal J, Palterer B, Bruneau J, Molina TJ, Leclerc-Mercier S, Pretet JL, Youssefian L, Vahidnezhad H, Parvaneh N, Claeys KG, Schrijvers R, Luka M, Perot P, Fourgeaud J, Nourrisson C, Poirier P, Jouanguy E, Boisson-Dupuis S, Bustamante J, Notarangelo LD, Christensen N, Landegren N, Abel L, Marr N, Six E, Langlais D, Waterboer T, Ginhoux F, Ma CS, Tangye SG, Meyts I, Lachmann N, Hu J, Shahrooei M, Bossuyt X, Casanova JL, Beziat V
  Title
FLT3L governs the development of partially overlapping hematopoietic lineages in humans and mice.
  Journal
Cell 187:2817-2837.e31 (2024)
DOI:10.1016/j.cell.2024.04.009
Reference
PMID:38422122 (IMD126)
  Authors
Materna M, Delmonte OM, Bosticardo M, Momenilandi M, Conrey PE, Charmeteau-De Muylder B, Bravetti C, Bellworthy R, Cederholm A, Staels F, Ganoza CA, Darko S, Sayed S, Le Floc'h C, Ogishi M, Rinchai D, Guenoun A, Bolze A, Khan T, Gervais A, Kruger R, Voller M, Palterer B, Sadeghi-Shabestari M, Langlois de Septenville A, Schramm CA, Shah S, Tello-Cajiao JJ, Pala F, Amini K, Campos JS, Lima NS, Eriksson D, Levy R, Seeleuthner Y, Jyonouchi S, Ata M, Al Ali F, Stittrich A, Deswarte C, Pereira A, Megret J, Le Voyer T, Bastard P, Berteloot L, Dussiot M, Vladikine N, Cardenas PP, Jouanguy E, Alqahtani M, Hasan A, Thanaraj TA, Rosain J, Al Qureshah F, Sabato V, Alyanakian MA, Leruez-Ville M, Rozenberg F, Haddad E, Regueiro JR, Toribio ML, Kelsen JR, Salehi M, Nasiri S, Torabizadeh M, Rokni-Zadeh H, Changi-Ashtiani M, Vatandoost N, Moravej H, Akrami SM, Mazloomrezaei M, Cobat A, Meyts I, Toyofuku E, Nishimura M, Moriya K, Mizukami T, Imai K, Abel L, Malissen B, Al-Mulla F, Alkuraya FS, Parvaneh N, von Bernuth H, Beetz C, Davi F, Douek DC, Cheynier R, Langlais D, Landegren N, Marr N, Morio T, Shahrooei M, Schrijvers R, Henrickson SE, Luche H, Notarangelo LD, Casanova JL, Beziat V
  Title
The immunopathological landscape of human pre-TCRalpha deficiency: From rare to common variants.
  Journal
Science 383:eadh4059 (2024)
DOI:10.1126/science.adh4059
Reference
PMID:39579173 (IMD132B)
  Authors
Urban B, Batlle-Maso L, Perurena-Prieto J, Garcia-Prat M, Parra-Martinez A, Aguilo-Cucurull A, Martinez-Gallo M, Moushib L, Antolin M, Riviere JG, Soler-Palacin P, Dieli-Crimi R, Franco-Jarava C, Colobran R
  Title
Heterozygous Predicted Loss-of-function Variants of TRAF3 in Patients with Common Variable Immunodeficiency.
  Journal
J Clin Immunol 45:47 (2024)
DOI:10.1007/s10875-024-01833-3
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