KEGG   PATHWAY: aaa00630
Entry
aaa00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Paracidovorax avenae
Class
Metabolism; Carbohydrate metabolism
Pathway map
aaa00630  Glyoxylate and dicarboxylate metabolism
aaa00630

Module
aaa_M00012  Glyoxylate cycle [PATH:aaa00630]
aaa_M00621  Glycine cleavage system [PATH:aaa00630]
Other DBs
GO: 0046487 0043648
Organism
Paracidovorax avenae [GN:aaa]
Gene
Acav_2379  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Acav_1539  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Acav_2427  Acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Acav_0469  malate synthase G [KO:K01638] [EC:2.3.3.9]
Acav_2936  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Acav_2943  citrate synthase I [KO:K01647] [EC:2.3.3.1]
Acav_2098  Citrate synthase [KO:K01647] [EC:2.3.3.1]
Acav_4695  Citrate synthase [KO:K01647] [EC:2.3.3.1]
Acav_3395  Citrate synthase [KO:K01647] [EC:2.3.3.1]
Acav_1161  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
Acav_2932  aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Acav_2734  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Acav_0041  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Acav_4265  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Acav_2363  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Acav_2733  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
Acav_2701  acetyl-CoA carboxylase, biotin carboxylase [KO:K01965] [EC:6.4.1.3]
Acav_2706  Propionyl-CoA carboxylase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
Acav_3400  Pyruvate carboxylase., Oxaloacetate decarboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Acav_2709  methylmalonyl-CoA mutase, large subunit [KO:K01847] [EC:5.4.99.2]
Acav_0615  D-lactate dehydrogenase (cytochrome) [KO:K00104] [EC:1.1.99.14]
Acav_0299  FAD linked oxidase domain protein [KO:K11472] [EC:1.1.99.14]
Acav_0301  protein of unknown function DUF224 cysteine-rich region domain protein [KO:K11473] [EC:1.1.99.14]
Acav_2135  Catalase [KO:K03781] [EC:1.11.1.6]
Acav_3894  Catalase [KO:K03781] [EC:1.11.1.6]
Acav_2961  Glyoxylate reductase (NADP(+)) [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Acav_4250  Hydroxypyruvate reductase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Acav_1950  Glyoxylate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
Acav_1189  HAD-superfamily hydrolase, subfamily IA, variant 1 [KO:K01091] [EC:3.1.3.18]
Acav_0506  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Acav_1481  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Acav_2305  Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Acav_2115  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
Acav_2117  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Acav_2752  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Acav_2783  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Acav_2002  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Acav_2116  glycine cleavage system H protein [KO:K02437]
Acav_1110  Hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
Acav_2953  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Acav_3069  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Acav_2468  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Acav_2087  Arylformamidase [KO:K01432] [EC:3.5.1.9]
Acav_1168  arylformamidase [KO:K07130] [EC:3.5.1.9]
Acav_0618  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Acav_0240  Formamidase [KO:K01455] [EC:3.5.1.49]
Acav_2337  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aaa00010  Glycolysis / Gluconeogenesis
aaa00020  Citrate cycle (TCA cycle)
aaa00030  Pentose phosphate pathway
aaa00053  Ascorbate and aldarate metabolism
aaa00071  Fatty acid degradation
aaa00230  Purine metabolism
aaa00250  Alanine, aspartate and glutamate metabolism
aaa00260  Glycine, serine and threonine metabolism
aaa00620  Pyruvate metabolism
aaa00710  Carbon fixation by Calvin cycle
aaa00750  Vitamin B6 metabolism
aaa00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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