KEGG   PATHWAY: abq00630
Entry
abq00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Azospirillum brasilense Az39
Class
Metabolism; Carbohydrate metabolism
Pathway map
abq00630  Glyoxylate and dicarboxylate metabolism
abq00630

Module
abq_M00012  Glyoxylate cycle [PATH:abq00630]
abq_M00621  Glycine cleavage system [PATH:abq00630]
abq_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:abq00630]
Other DBs
GO: 0046487 0043648
Organism
Azospirillum brasilense Az39 [GN:abq]
Gene
ABAZ39_13455  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
ABAZ39_20310  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
ABAZ39_12800  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
ABAZ39_24685  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
ABAZ39_10150  malate synthase [KO:K01638] [EC:2.3.3.9]
ABAZ39_01350  malate synthase [KO:K01638] [EC:2.3.3.9]
ABAZ39_12205  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
ABAZ39_24420  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
ABAZ39_08140  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
ABAZ39_01095  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
ABAZ39_22880  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
ABAZ39_24635  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ABAZ39_30910  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ABAZ39_27860  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ABAZ39_25300  hypothetical protein [KO:K00626] [EC:2.3.1.9]
ABAZ39_30915  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
ABAZ39_24060  3-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
ABAZ39_10485  dehydratase [KO:K17865] [EC:4.2.1.55]
ABAZ39_28990  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
ABAZ39_08305  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
ABAZ39_30385  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
ABAZ39_21945  acetyl-CoA carboxylase [KO:K01965] [EC:6.4.1.3]
ABAZ39_21950  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
ABAZ39_16200  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
ABAZ39_16205  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
ABAZ39_21935  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
ABAZ39_09855  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
ABAZ39_09850  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
ABAZ39_09845  2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
ABAZ39_13355  catalase [KO:K03781] [EC:1.11.1.6]
ABAZ39_31705  catalase [KO:K03781] [EC:1.11.1.6]
ABAZ39_14520  2-hydroxyacid dehydrogenase [KO:K00015] [EC:1.1.1.26]
ABAZ39_01900  hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
ABAZ39_05560  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
ABAZ39_08640  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
ABAZ39_32665  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
ABAZ39_17480  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
ABAZ39_06770  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
ABAZ39_08465  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
ABAZ39_05890  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
ABAZ39_04645  glycine dehydrogenase [KO:K00282] [EC:1.4.4.2]
ABAZ39_04650  glycine dehydrogenase [KO:K00283] [EC:1.4.4.2]
ABAZ39_04635  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
ABAZ39_02060  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
ABAZ39_17550  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
ABAZ39_04640  glycine cleavage system protein H [KO:K02437]
ABAZ39_07555  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
ABAZ39_07560  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
ABAZ39_07565  tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
ABAZ39_07570  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
ABAZ39_30515  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
ABAZ39_16950  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
ABAZ39_15685  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
ABAZ39_16960  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
ABAZ39_21610  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
ABAZ39_10325  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
ABAZ39_32370  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
ABAZ39_32375  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
ABAZ39_15680  formate dehydrogenase [KO:K00124]
ABAZ39_10320  formate dehydrogenase [KO:K00124]
ABAZ39_21605  formate dehydrogenase [KO:K00124]
ABAZ39_16965  formate dehydrogenase [KO:K00124]
ABAZ39_15675  formate dehydrogenase [KO:K00127]
ABAZ39_10310  formate dehydrogenase [KO:K00127]
ABAZ39_21600  formate dehydrogenase [KO:K00127]
ABAZ39_16970  ATP synthase subunit E [KO:K00127]
ABAZ39_02220  hypothetical protein [KO:K01432] [EC:3.5.1.9]
ABAZ39_21190  esterase [KO:K01432] [EC:3.5.1.9]
ABAZ39_18135  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
ABAZ39_16455  formamidase [KO:K01455] [EC:3.5.1.49]
ABAZ39_23240  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
ABAZ39_07405  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
ABAZ39_32380  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
ABAZ39_07620  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
ABAZ39_32350  formyl-coenzyme A transferase [KO:K07749] [EC:2.8.3.16]
ABAZ39_07615  formyl-coenzyme A transferase [KO:K07749] [EC:2.8.3.16]
ABAZ39_26520  formyl-coenzyme A transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
abq00010  Glycolysis / Gluconeogenesis
abq00020  Citrate cycle (TCA cycle)
abq00030  Pentose phosphate pathway
abq00053  Ascorbate and aldarate metabolism
abq00071  Fatty acid degradation
abq00230  Purine metabolism
abq00250  Alanine, aspartate and glutamate metabolism
abq00260  Glycine, serine and threonine metabolism
abq00620  Pyruvate metabolism
abq00710  Carbon fixation by Calvin cycle
abq00750  Vitamin B6 metabolism
abq00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system