KEGG   PATHWAY: aly00360
Entry
aly00360                    Pathway                                
Name
Phenylalanine metabolism - Arabidopsis lyrata (lyrate rockcress)
Class
Metabolism; Amino acid metabolism
Pathway map
aly00360  Phenylalanine metabolism
aly00360

Other DBs
GO: 0006558
Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
9322341  tyrosine decarboxylase 1 [KO:K01593] [EC:4.1.1.28 4.1.1.105]
9311682  primary amine oxidase isoform X1 [KO:K00276] [EC:1.4.3.21]
9327006  primary amine oxidase [KO:K00276] [EC:1.4.3.21]
9327008  LOW QUALITY PROTEIN: primary amine oxidase [KO:K00276] [EC:1.4.3.21]
9306342  primary amine oxidase 1 [KO:K00276] [EC:1.4.3.21]
9322518  primary amine oxidase [KO:K00276] [EC:1.4.3.21]
9317922  uncharacterized protein LOC9317922 [KO:K00276] [EC:1.4.3.21]
9310828  LOW QUALITY PROTEIN: primary amine oxidase [KO:K00276] [EC:1.4.3.21]
9313366  primary amine oxidase [KO:K00276] [EC:1.4.3.21]
9308719  primary amine oxidase isoform X1 [KO:K00276] [EC:1.4.3.21]
9306245  probable enoyl-CoA hydratase 1, peroxisomal [KO:K01692] [EC:4.2.1.17]
9298235  uncharacterized protein LOC9298235 [KO:K00074] [EC:1.1.1.157]
9321144  uncharacterized protein LOC9321144 [KO:K00074] [EC:1.1.1.157]
9322519  aspartate aminotransferase, cytoplasmic isozyme 2 [KO:K14454] [EC:2.6.1.1]
9307962  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
9307549  aspartate aminotransferase 3, chloroplastic [KO:K14454] [EC:2.6.1.1]
9317213  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
9305371  aspartate aminotransferase, chloroplastic [KO:K00811] [EC:2.6.1.1]
9316505  bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase isoform X1 [KO:K15849] [EC:2.6.1.1 2.6.1.78 2.6.1.79]
9314873  probable aminotransferase TAT3 [KO:K00815] [EC:2.6.1.5]
9306540  tyrosine aminotransferase [KO:K00815] [EC:2.6.1.5]
9305575  probable aminotransferase TAT1 [KO:K00815] [EC:2.6.1.5]
110226039  S-alkyl-thiohydroximate lyase SUR1 isoform X1 [KO:K00815] [EC:2.6.1.5]
9302085  probable aminotransferase TAT2 [KO:K00815] [EC:2.6.1.5]
9305843  probable aminotransferase TAT4 [KO:K00815] [EC:2.6.1.5]
9323464  histidinol-phosphate aminotransferase 1, chloroplastic isoform X1 [KO:K00817] [EC:2.6.1.9]
9325674  4-hydroxyphenylpyruvate dioxygenase [KO:K00457] [EC:1.13.11.27]
9302262  macrophage migration inhibitory factor homolog isoform X2 [KO:K07253] [EC:5.3.2.1]
9302263  macrophage migration inhibitory factor homolog [KO:K07253] [EC:5.3.2.1]
9306977  macrophage migration inhibitory factor homolog isoform X1 [KO:K07253] [EC:5.3.2.1]
9312166  macrophage migration inhibitory factor homolog [KO:K07253] [EC:5.3.2.1]
9303173  putative amidase C869.01 [KO:K01426] [EC:3.5.1.4]
9325791  amidase 1 [KO:K01426] [EC:3.5.1.4]
9317554  phenylalanine ammonia-lyase 1 [KO:K10775] [EC:4.3.1.24]
9309209  phenylalanine ammonia-lyase 3 [KO:K10775] [EC:4.3.1.24]
9312266  phenylalanine ammonia-lyase 2 [KO:K10775] [EC:4.3.1.24]
9318728  phenylalanine ammonia-lyase 4 isoform X2 [KO:K10775] [EC:4.3.1.24]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00042  Succinate
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00084  Acetaldehyde
C00091  Succinyl-CoA
C00122  Fumarate
C00166  Phenylpyruvate
C00423  trans-Cinnamate
C00512  Benzoyl-CoA
C00582  Phenylacetyl-CoA
C00596  2-Hydroxy-2,4-pentadienoate
C00601  Phenylacetaldehyde
C00642  4-Hydroxyphenylacetate
C01198  3-(2-Hydroxyphenyl)propanoate
C01772  trans-2-Hydroxycinnamate
C02137  alpha-Oxo-benzeneacetic acid
C02232  3-Oxoadipyl-CoA
C02265  D-Phenylalanine
C02505  2-Phenylacetamide
C02763  2-Hydroxy-3-phenylpropenoate
C03519  N-Acetyl-L-phenylalanine
C03589  4-Hydroxy-2-oxopentanoate
C04044  3-(2,3-Dihydroxyphenyl)propanoate
C04148  Phenylacetylglutamine
C04479  2-Hydroxy-6-oxonona-2,4-diene-1,9-dioate
C05332  Phenethylamine
C05593  3-Hydroxyphenylacetate
C05598  Phenylacetylglycine
C05607  Phenyllactate
C05629  Phenylpropanoate
C05852  2-Hydroxyphenylacetate
C05853  Phenylethyl alcohol
C06207  2,6-Dihydroxyphenylacetate
C07086  Phenylacetic acid
C11457  3-(3-Hydroxyphenyl)propanoic acid
C11588  cis-3-(Carboxy-ethyl)-3,5-cyclo-hexadiene-1,2-diol
C12621  trans-3-Hydroxycinnamate
C12622  cis-3-(3-Carboxyethenyl)-3,5-cyclohexadiene-1,2-diol
C12623  trans-2,3-Dihydroxycinnamate
C12624  2-Hydroxy-6-ketononatrienedioate
C14144  5-Carboxy-2-pentenoyl-CoA
C14145  (3S)-3-Hydroxyadipyl-CoA
C15524  Phenylglyoxylyl-CoA
C19945  3-Oxo-5,6-dehydrosuberyl-CoA
C19946  3-Oxo-5,6-dehydrosuberyl-CoA semialdehyde
C19975  2-Oxepin-2(3H)-ylideneacetyl-CoA
C20062  2-(1,2-Epoxy-1,2-dihydrophenyl)acetyl-CoA
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:10537203
  Authors
Arai H, Yamamoto T, Ohishi T, Shimizu T, Nakata T, Kudo T.
  Title
Genetic organization and characteristics of the 3-(3-hydroxyphenyl)propionic acid degradation pathway of Comamonas testosteroni TA441.
  Journal
Microbiology 145 ( Pt 10):2813-20 (1999)
DOI:10.1099/00221287-145-10-2813
Reference
PMID:9603882
  Authors
Diaz E, Ferrandez A, Garcia JL.
  Title
Characterization of the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid in Escherichia coli K-12.
  Journal
J Bacteriol 180:2915-23 (1998)
DOI:10.1128/JB.180.11.2915-2923.1998
Reference
PMID:9098055
  Authors
Ferrandez A, Garcia JL, Diaz E.
  Title
Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12.
  Journal
J Bacteriol 179:2573-81 (1997)
DOI:10.1128/JB.179.8.2573-2581.1997
Reference
PMID:19016485
  Authors
Hwang JY, Park J, Seo JH, Cha M, Cho BK, Kim J, Kim BG
  Title
Simultaneous synthesis of 2-phenylethanol and L-homophenylalanine using aromatic transaminase with yeast Ehrlich pathway.
  Journal
Biotechnol Bioeng 102:1323-9 (2009)
DOI:10.1002/bit.22178
Reference
PMID:20660314
  Authors
Teufel R, Mascaraque V, Ismail W, Voss M, Perera J, Eisenreich W, Haehnel W, Fuchs G
  Title
Bacterial phenylalanine and phenylacetate catabolic pathway revealed.
  Journal
Proc Natl Acad Sci U S A 107:14390-5 (2010)
DOI:10.1073/pnas.1005399107
Related
pathway
aly00010  Glycolysis / Gluconeogenesis
aly00020  Citrate cycle (TCA cycle)
aly00350  Tyrosine metabolism
aly00400  Phenylalanine, tyrosine and tryptophan biosynthesis
aly00960  Tropane, piperidine and pyridine alkaloid biosynthesis
KO pathway
ko00360   
LinkDB

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