KEGG   PATHWAY: aly00592
Entry
aly00592                    Pathway                                
Name
alpha-Linolenic acid metabolism - Arabidopsis lyrata (lyrate rockcress)
Class
Metabolism; Lipid metabolism
Pathway map
aly00592  alpha-Linolenic acid metabolism
aly00592

Module
aly_M00113  Jasmonic acid biosynthesis [PATH:aly00592]
Other DBs
GO: 0036109
Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
9319809  phospholipase A2-alpha [KO:K01047] [EC:3.1.1.4]
9312468  triacylglycerol lipase SDP1L [KO:K14674] [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]
9309201  triacylglycerol lipase SDP1 [KO:K14674] [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]
9316206  phospholipase A(1) DAD1, chloroplastic [KO:K16818] [EC:3.1.1.32]
9303989  lecithin-cholesterol acyltransferase-like 4 [KO:K22389] [EC:3.1.1.32]
9320436  phospholipase A(1) LCAT3 isoform X1 [KO:K22389] [EC:3.1.1.32]
9323501  lipoxygenase 4, chloroplastic [KO:K00454] [EC:1.13.11.12]
9323195  lipoxygenase 6, chloroplastic [KO:K00454] [EC:1.13.11.12]
9313456  lipoxygenase 2, chloroplastic [KO:K00454] [EC:1.13.11.12]
9329013  lipoxygenase 3, chloroplastic [KO:K00454] [EC:1.13.11.12]
9299830  allene oxide synthase, chloroplastic [KO:K01723] [EC:4.2.1.92]
9301581  allene oxide synthase, chloroplastic [KO:K01723] [EC:4.2.1.92]
9311347  allene oxide cyclase 3, chloroplastic [KO:K10525] [EC:5.3.99.6]
9311346  allene oxide cyclase 2, chloroplastic [KO:K10525] [EC:5.3.99.6]
9311345  allene oxide cyclase 1, chloroplastic [KO:K10525] [EC:5.3.99.6]
9326060  allene oxide cyclase 4, chloroplastic [KO:K10525] [EC:5.3.99.6]
9321879  12-oxophytodienoate reductase 3 [KO:K05894] [EC:1.3.1.42]
110230618  12-oxophytodienoate reductase 2 [KO:K05894] [EC:1.3.1.42]
9325159  12-oxophytodienoate reductase 1 [KO:K05894] [EC:1.3.1.42]
110225136  putative 12-oxophytodienoate reductase-like protein 1 [KO:K05894] [EC:1.3.1.42]
9325812  putative 12-oxophytodienoate reductase-like protein 1 [KO:K05894] [EC:1.3.1.42]
110224657  4-coumarate--CoA ligase-like 8 [KO:K10526] [EC:6.2.1.-]
9329175  4-coumarate--CoA ligase-like 5 [KO:K10526] [EC:6.2.1.-]
9306937  4-coumarate--CoA ligase-like 8 [KO:K10526] [EC:6.2.1.-]
9326453  4-coumarate--CoA ligase-like 2 [KO:K10526] [EC:6.2.1.-]
110225191  4-coumarate--CoA ligase-like 4 [KO:K10526] [EC:6.2.1.-]
9312174  acyl-coenzyme A oxidase 4, peroxisomal [KO:K00232] [EC:1.3.3.6]
9304175  peroxisomal acyl-coenzyme A oxidase 1 [KO:K00232] [EC:1.3.3.6]
9328396  acyl-coenzyme A oxidase 3, peroxisomal [KO:K00232] [EC:1.3.3.6]
9317475  putative peroxisomal acyl-coenzyme A oxidase 1.2 [KO:K00232] [EC:1.3.3.6]
9325662  putative acyl-coenzyme A oxidase 3.2, peroxisomal [KO:K00232] [EC:1.3.3.6]
9298470  putative peroxisomal acyl-coenzyme A oxidase 1.2 [KO:K00232] [EC:1.3.3.6]
9302722  acyl-coenzyme A oxidase 2, peroxisomal [KO:K00232] [EC:1.3.3.6]
9320679  peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 isoform X1 [KO:K10527] [EC:4.2.1.17 1.1.1.35 1.1.1.211]
9305530  peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [KO:K10527] [EC:4.2.1.17 1.1.1.35 1.1.1.211]
9317332  3-ketoacyl-CoA thiolase 2, peroxisomal [KO:K07513] [EC:2.3.1.16]
9328300  3-ketoacyl-CoA thiolase 1, peroxisomal [KO:K07513] [EC:2.3.1.16]
9300002  3-ketoacyl-CoA thiolase 5, peroxisomal isoform X1 [KO:K07513] [EC:2.3.1.16]
9329119  jasmonate O-methyltransferase [KO:K08241] [EC:2.1.1.141]
9306309  linolenate hydroperoxide lyase, chloroplastic [KO:K10528] [EC:4.1.2.-]
9323734  alcohol dehydrogenase class-P [KO:K18857] [EC:1.1.1.1]
9299357  chloroplast envelope quinone oxidoreductase homolog [KO:K00224] [EC:1.3.1.-]
9318251  alpha-dioxygenase 1 [KO:K10529] [EC:1.13.11.92]
9323562  alpha-dioxygenase 2 [KO:K10529] [EC:1.13.11.92]
Compound
C00157  Phosphatidylcholine
C01226  (9S,13S,15Z)-12-Oxophyto-10,15-dienoate
C04672  (9Z,15Z)-(13S)-12,13-Epoxyoctadeca-9,11,15-trienoic acid
C04780  (9S,13S,15Z)-12-Oxo-10,11-dihydrophyto-15-enoate
C04785  13(S)-HPOT
C06427  (9Z,12Z,15Z)-Octadecatrienoic acid
C08491  (-)-Jasmonic acid
C08492  3-Hexenol
C11512  Methyl jasmonate
C16300  Stearidonic acid
C16308  Traumatic acid
C16309  Traumatin
C16310  3-Hexenal
C16311  12-Oxo-9(Z)-dodecenoic acid
C16316  13(S)-HOT
C16317  (+)-7-Isojasmonic acid
C16318  (+)-7-Isomethyljasmonate
C16319  Etherolenic acid
C16320  Colnelenic acid
C16321  9(S)-HPOT
C16322  9-Oxononanoic acid
C16323  3,6-Nonadienal
C16324  9,10-EOT
C16325  10-OPDA
C16326  9(S)-HOT
C16327  OPC8-CoA
C16328  trans-2-Enoyl-OPC8-CoA
C16330  3-Oxo-OPC8-CoA
C16331  OPC6-CoA
C16332  trans-2-Enoyl-OPC6-CoA
C16334  3-Oxo-OPC6-CoA
C16335  OPC4-CoA
C16336  trans-2-Enoyl-OPC4-CoA
C16338  3-Oxo-OPC4-CoA
C16339  (+)-7-Isojasmonic acid CoA
C16341  2(R)-HPOT
C16342  2(R)-HOT
C16343  Heptadecatrienal
C16344  Norlinolenic acid
C16345  Volicitin
C16346  17-Hydroxylinolenic acid
C19757  (3Z)-Hex-3-en-1-yl acetate
C21923  9-Hydroxy-12-oxo-10(E),15(Z)-octadecadienoic acid
C21924  9-Hydroxy-12-oxo-15(Z)-octadecenoic acid
Reference
PMID:17172287
  Authors
Schilmiller AL, Koo AJ, Howe GA.
  Title
Functional diversification of acyl-coenzyme A oxidases in jasmonic acid biosynthesis and action.
  Journal
Plant Physiol 143:812-24 (2007)
DOI:10.1104/pp.106.092916
Reference
PMID:15141068
  Authors
Cruz Castillo M, Martinez C, Buchala A, Metraux JP, Leon J.
  Title
Gene-specific involvement of beta-oxidation in wound-activated responses in Arabidopsis.
  Journal
Plant Physiol 135:85-94 (2004)
DOI:10.1104/pp.104.039925
Reference
PMID:17215350
  Authors
Truman W, Bennett MH, Kubigsteltig I, Turnbull C, Grant M.
  Title
Arabidopsis systemic immunity uses conserved defense signaling pathways and is mediated by jasmonates.
  Journal
Proc Natl Acad Sci U S A 104:1075-80 (2007)
DOI:10.1073/pnas.0605423104
Reference
PMID:16116284
  Authors
Kuroda H, Oshima T, Kaneda H, Takashio M.
  Title
Identification and functional analyses of two cDNAs that encode fatty acid 9-/13-hydroperoxide lyase (CYP74C) in rice.
  Journal
Biosci Biotechnol Biochem 69:1545-54 (2005)
DOI:10.1271/bbb.69.1545
Reference
PMID:15670154
  Authors
Hamberg M.
  Title
Hidden stereospecificity in the biosynthesis of divinyl ether fatty acids.
  Journal
FEBS J 272:736-43 (2005)
DOI:10.1111/j.1742-4658.2004.04510.x
Reference
PMID:14522973
  Authors
Hamberg M, Sanz A, Rodriguez MJ, Calvo AP, Castresana C.
  Title
Activation of the fatty acid alpha-dioxygenase pathway during bacterial infection of tobacco leaves. Formation of oxylipins protecting against cell death.
  Journal
J Biol Chem 278:51796-805 (2003)
DOI:10.1074/jbc.M310514200
Reference
  Authors
Creelman RA, Mulpuri R.
  Title
The Oxylipin Pathway in Arabidopsis
  Journal
The Arabidopsis Book 1:e0012 (2002)
DOI:10.1199/tab.0012
KO pathway
ko00592   
LinkDB

DBGET integrated database retrieval system